RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 EPC1Q9H2F5 836 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 RANBP17Q9H2T7 1088 aaKnown RBP6.03□□□□□ -1.44
CKAP4-203ENST00000553039 SETD4Q9NVD3 440 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 DNAAF2Q9NVR5 837 aaKnown RBP6.03□□□□□ -1.44
CKAP4-203ENST00000553039 SMG5Q9UPR3 1016 aaKnown RBP6.03□□□□□ -1.44
CKAP4-203ENST00000553039 MCM3APO60318 1980 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 MICAL3Q7RTP6 2002 aa6.03□□□□□ -1.44
CKAP4-203ENST00000553039 NRCAMQ92823 1304 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 MYO15AQ9UKN7 3530 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 KRBA1A5PL33 1030 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 CXCL14O95715 111 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 APPP05067 770 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 SRFP11831 508 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 SCG2P13521 617 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 LAG3P18627 525 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 HOXC8P31273 242 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 ADD2P35612 726 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 PPM1AP35813 382 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 PTK2Q05397 1052 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 SPEM2Q0P670 501 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 SMC1AQ14683 1233 aaKnown RBP6.02□□□□□ -1.45
CKAP4-203ENST00000553039 LPIN1Q14693 890 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 PPP2R5DQ14738 602 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 SF3A1Q15459 793 aaKnown RBP6.02□□□□□ -1.45
CKAP4-203ENST00000553039 PTPN14Q15678 1187 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 CSRP2Q16527 193 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 CCDC96Q2M329 555 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 HSP90AB4PQ58FF6 505 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 ODR4Q5SWX8 454 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 SYDE2Q5VT97 1194 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 LAIR1Q6GTX8 287 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 DCLRE1AQ6PJP8 1040 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 UNQ6494/PRO21346Q6UXR6 183 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 TSHZ1Q6ZSZ6 1077 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 RTN4RL1Q86UN2 441 aaPredicted RBP6.02□□□□□ -1.45
CKAP4-203ENST00000553039 AACSQ86V21 672 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 CABP7Q86V35 215 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 PPFIBP1Q86W92 1011 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 CRIPAKQ8N1N5 446 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 SLC44A3Q8N4M1 653 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 ARMC2Q8NEN0 867 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 DCAF4Q8WV16 495 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 UBXN4Q92575 508 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 STAMQ92783 540 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 TNPO1Q92973 898 aaKnown RBP6.02□□□□□ -1.45
CKAP4-203ENST00000553039 CHMP4CQ96CF2 233 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 DNAJC2Q99543 621 aaKnown RBP6.02□□□□□ -1.45
CKAP4-203ENST00000553039 USB1Q9BQ65 265 aaKnown RBP6.02□□□□□ -1.45
CKAP4-203ENST00000553039 OCSTAMPQ9BR26 566 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 OSBPL7Q9BZF2 842 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 OSBPL6Q9BZF3 934 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 TYW1Q9NV66 732 aaKnown RBP6.02□□□□□ -1.45
CKAP4-203ENST00000553039 DLGAP2Q9P1A6 1054 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 DCTN4Q9UJW0 460 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 ZNF215Q9UL58 517 aaPredicted RBP6.02□□□□□ -1.45
CKAP4-203ENST00000553039 CA14Q9ULX7 337 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 STX8Q9UNK0 236 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 HCFC2Q9Y5Z7 792 aa6.02□□□□□ -1.45
CKAP4-203ENST00000553039 COL11A1P12107 1806 aaPredicted RBP6.02□□□□□ -1.45
CKAP4-203ENST00000553039 SETXQ7Z333 2677 aaKnown RBP6.01□□□□□ -1.45
CKAP4-203ENST00000553039 TBKBP1A7MCY6 615 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 HIDE1A8MVS5 230 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 M0QZ92 97 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 TAF4O00268 1085 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 NOP56O00567 594 aaKnown RBP6.01□□□□□ -1.45
CKAP4-203ENST00000553039 LILRB5O75023 590 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 CLASP2O75122 1294 aaKnown RBP6.01□□□□□ -1.45
CKAP4-203ENST00000553039 BCAR3O75815 825 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 NR3C2P08235 984 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 WEE2P0C1S8 567 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 HSPD1P10809 573 aaKnown RBP6.01□□□□□ -1.45
CKAP4-203ENST00000553039 HOXB1P14653 301 aaPredicted RBP6.01□□□□□ -1.45
CKAP4-203ENST00000553039 GNAT2P19087 354 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 STARD6P59095 220 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 ARHGAP4P98171 946 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 RING1Q06587 406 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 FBXO47Q5MNV8 452 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 ELMSAN1Q6PJG2 1045 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 BRICD5Q6PL45 260 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 CYP26C1Q6V0L0 522 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 SLC30A10Q6XR72 485 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 GPR149Q86SP6 731 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 CLASRPQ8N2M8 674 aaKnown RBP6.01□□□□□ -1.45
CKAP4-203ENST00000553039 COLGALT1Q8NBJ5 622 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 KLHL5Q96PQ7 755 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 TAAR1Q96RJ0 339 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 STRBPQ96SI9 672 aaKnown RBP6.01□□□□□ -1.45
CKAP4-203ENST00000553039 NACAP1Q9BZK3 213 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 BCL11AQ9H165 835 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 SEMA4GQ9NTN9 838 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 TLR7Q9NYK1 1049 aaKnown RBP6.01□□□□□ -1.45
CKAP4-203ENST00000553039 SPG21Q9NZD8 308 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 SEPT9Q9UHD8 586 aaPredicted RBP6.01□□□□□ -1.45
CKAP4-203ENST00000553039 DPP7Q9UHL4 492 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 ZFHX4Q86UP3 3567 aa6.01□□□□□ -1.45
CKAP4-203ENST00000553039 CNOT1A5YKK6 2376 aaKnown RBP6.01□□□□□ -1.45
CKAP4-203ENST00000553039 ZBED9Q6R2W3 1325 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 ZFYVE26Q68DK2 2539 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 KANSL1LA0AUZ9 987 aa6□□□□□ -1.45
CKAP4-203ENST00000553039 C2orf71A6NGG8 1288 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms