RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 BBXQ8WY36 941 aaPredicted RBP13.44□□□□□ -0.26
CKAP4-202ENST00000552828 SUSD6Q92537 303 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 JAKMIP1Q96N16 626 aaKnown RBP13.44□□□□□ -0.26
CKAP4-202ENST00000552828 TLR9Q9NR96 1032 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 TYW1Q9NV66 732 aaKnown RBP13.44□□□□□ -0.26
CKAP4-202ENST00000552828 TMEM161AQ9NX61 479 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 BARX2Q9UMQ3 279 aaPredicted RBP13.44□□□□□ -0.26
CKAP4-202ENST00000552828 GINS2Q9Y248 185 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 LZTS1Q9Y250 596 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 USP15Q9Y4E8 981 aaPredicted RBP13.44□□□□□ -0.26
CKAP4-202ENST00000552828 PCDHGC5Q9Y5F6 944 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 ZNF318Q5VUA4 2279 aa13.44□□□□□ -0.26
CKAP4-202ENST00000552828 GOLGA8AA7E2F4 631 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 TBKBP1A7MCY6 615 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 GOLGA8BA8MQT2 603 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 DDX39AO00148 427 aaKnown RBP13.43□□□□□ -0.26
CKAP4-202ENST00000552828 PPFIA3O75145 1194 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 FGF18O76093 207 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 ATF7P17544 494 aaPredicted RBP13.43□□□□□ -0.26
CKAP4-202ENST00000552828 MRE11P49959 708 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 ERVFC1P60507 584 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 FGD1P98174 961 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 PLCB3Q01970 1234 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 PKN1Q16512 942 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 DUSP6Q16828 381 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 KIZQ2M2Z5 673 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 JAKMIP3Q5VZ66 844 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 BLOC1S2Q6QNY1 142 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 TRIM67Q6ZTA4 783 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 FAM228AQ86W67 206 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 ZNF710Q8N1W2 664 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 COLGALT1Q8NBJ5 622 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 VN1R2Q8NFZ6 395 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 TCEANC2Q96MN5 208 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 PHF7Q9BWX1 381 aaPredicted RBP13.43□□□□□ -0.26
CKAP4-202ENST00000552828 ZMYND12Q9H0C1 365 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 CWH43Q9H720 699 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 ATP6V0A4Q9HBG4 840 aa13.43□□□□□ -0.26
CKAP4-202ENST00000552828 TECTAO75443 2155 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 KLF18A0A0U1RQI7 1052 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 PER2O15055 1255 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 MAGEB2O15479 319 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 CIITAP33076 1130 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 ADD1P35611 737 aaKnown RBP13.42□□□□□ -0.26
CKAP4-202ENST00000552828 ZXDAP98168 799 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 SETQ01105 290 aaPredicted RBP13.42□□□□□ -0.26
CKAP4-202ENST00000552828 LINC01465Q8N7H1 131 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 RASGRP4Q8TDF6 673 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 MICAL1Q8TDZ2 1067 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 OSMRQ99650 979 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 ZNF577Q9BSK1 485 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 PCDHA10Q9Y5I2 948 aa13.42□□□□□ -0.26
CKAP4-202ENST00000552828 KIAA1671Q9BY89 1806 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 CCDC196A0A1B0GTZ2 297 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 TMEM221A6NGB7 291 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 M0R296 226 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 ADAMTS3O15072 1205 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 PSAPP07602 524 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 FGFR1P11362 822 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 LAG3P18627 525 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 RBM10P98175 930 aaKnown RBP13.41□□□□□ -0.26
CKAP4-202ENST00000552828 SPOUT1Q5T280 376 aaKnown RBP13.41□□□□□ -0.26
CKAP4-202ENST00000552828 CKAP2LQ8IYA6 745 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 THNSL1Q8IYQ7 743 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 REXO1Q8N1G1 1221 aaKnown RBP13.41□□□□□ -0.26
CKAP4-202ENST00000552828 METTL13Q8N6R0 699 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 LENG9Q96B70 501 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 CASD1Q96PB1 797 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 TMEM117Q9H0C3 514 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 S1PR5Q9H228 398 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 ADAMTS10Q9H324 1103 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 C6orf50Q9HD87 102 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 RNF19AQ9NV58 838 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 HCSTQ9UBK5 93 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 CEP131Q9UPN4 1083 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 NID2Q14112 1375 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 USP34Q70CQ2 3546 aa13.41□□□□□ -0.26
CKAP4-202ENST00000552828 HOXA2O43364 376 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 PRPF3O43395 683 aaKnown RBP13.4□□□□□ -0.26
CKAP4-202ENST00000552828 SEC24BO95487 1268 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 VTNP04004 478 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 CPA1P15085 419 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 RPS6KB1P23443 525 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 EIF4BP23588 611 aaKnown RBP13.4□□□□□ -0.26
CKAP4-202ENST00000552828 ANAPC15P60006 121 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 C8orf34Q49A92 452 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 LRRC55Q6ZSA7 311 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 FBXL16Q8N461 479 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 CCDC12Q8WUD4 166 aaPredicted RBP13.4□□□□□ -0.26
CKAP4-202ENST00000552828 MRPS27Q92552 414 aaKnown RBP13.4□□□□□ -0.26
CKAP4-202ENST00000552828 PBXIP1Q96AQ6 731 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 FAM167AQ96KS9 214 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 TM6SF1Q9BZW5 370 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 ZSWIM6Q9HCJ5 1215 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 NGRNQ9NPE2 291 aaKnown RBP13.4□□□□□ -0.26
CKAP4-202ENST00000552828 GABBR1Q9UBS5 961 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 PUF60Q9UHX1 559 aaKnown RBP13.4□□□□□ -0.26
CKAP4-202ENST00000552828 CYP46A1Q9Y6A2 500 aa13.4□□□□□ -0.26
CKAP4-202ENST00000552828 EDIL3O43854 480 aa13.39□□□□□ -0.27
CKAP4-202ENST00000552828 SRGAP2BP0DMP2 458 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms