RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 KIZQ2M2Z5 673 aa18.28■□□□□ 0.52
GCN1-209ENST00000551920 FOXD4L6Q3SYB3 417 aaPredicted RBP18.28■□□□□ 0.52
GCN1-209ENST00000551920 PLEKHG4Q58EX7 1191 aa18.28■□□□□ 0.52
GCN1-209ENST00000551920 XKR9Q5GH70 373 aa18.28■□□□□ 0.52
GCN1-209ENST00000551920 FBXO47Q5MNV8 452 aa18.28■□□□□ 0.52
GCN1-209ENST00000551920 FAM109BQ6ICB4 259 aaPredicted RBP18.28■□□□□ 0.52
GCN1-209ENST00000551920 FOXD4L3Q6VB84 417 aaPredicted RBP18.28■□□□□ 0.52
GCN1-209ENST00000551920 RPUSD2Q8IZ73 545 aaKnown RBP18.28■□□□□ 0.52
GCN1-209ENST00000551920 TMEM40Q8WWA1 233 aa18.28■□□□□ 0.52
GCN1-209ENST00000551920 RAB34Q9BZG1 259 aa18.28■□□□□ 0.52
GCN1-209ENST00000551920 SUGCTQ9HAC7 445 aa18.28■□□□□ 0.52
GCN1-209ENST00000551920 XPNPEP1Q9NQW7 623 aa18.28■□□□□ 0.52
GCN1-209ENST00000551920 FBXO2Q9UK22 296 aaPredicted RBP18.28■□□□□ 0.52
GCN1-209ENST00000551920 TRPV2Q9Y5S1 764 aa18.28■□□□□ 0.52
GCN1-209ENST00000551920 KDM3AQ9Y4C1 1321 aa18.27■□□□□ 0.52
GCN1-209ENST00000551920 GPR32O75388 356 aa18.27■□□□□ 0.52
GCN1-209ENST00000551920 FGBP02675 491 aa18.27■□□□□ 0.52
GCN1-209ENST00000551920 MARCKSP29966 332 aaPredicted RBP18.27■□□□□ 0.52
GCN1-209ENST00000551920 DDIT3P35638 169 aa18.27■□□□□ 0.52
GCN1-209ENST00000551920 EMC2Q15006 297 aa18.27■□□□□ 0.52
GCN1-209ENST00000551920 IER5Q5VY09 327 aa18.27■□□□□ 0.52
GCN1-209ENST00000551920 KCNK18Q7Z418 384 aa18.27■□□□□ 0.52
GCN1-209ENST00000551920 NME8Q8N427 588 aa18.27■□□□□ 0.52
GCN1-209ENST00000551920 DBF4BQ8NFT6 615 aa18.27■□□□□ 0.52
GCN1-209ENST00000551920 ZNF668Q96K58 619 aaPredicted RBP18.27■□□□□ 0.52
GCN1-209ENST00000551920 CELF4Q9BZC1 486 aaKnown RBP18.27■□□□□ 0.52
GCN1-209ENST00000551920 ADAMTS10Q9H324 1103 aa18.27■□□□□ 0.52
GCN1-209ENST00000551920 AGO3Q9H9G7 860 aaKnown RBP18.27■□□□□ 0.52
GCN1-209ENST00000551920 ANKEF1Q9NU02 776 aa18.27■□□□□ 0.52
GCN1-209ENST00000551920 PDIA4P13667 645 aaKnown RBP18.26■□□□□ 0.51
GCN1-209ENST00000551920 RFC5P40937 340 aa18.26■□□□□ 0.51
GCN1-209ENST00000551920 POLGP54098 1239 aaPredicted RBP18.26■□□□□ 0.51
GCN1-209ENST00000551920 CNKSR3Q6P9H4 555 aa18.26■□□□□ 0.51
GCN1-209ENST00000551920 OTUD6AQ7L8S5 288 aa18.26■□□□□ 0.51
GCN1-209ENST00000551920 LRRC15Q8TF66 581 aa18.26■□□□□ 0.51
GCN1-209ENST00000551920 SLC7A3Q8WY07 619 aa18.26■□□□□ 0.51
GCN1-209ENST00000551920 CHAMP1Q96JM3 812 aa18.26■□□□□ 0.51
GCN1-209ENST00000551920 PNMA5Q96PV4 448 aa18.26■□□□□ 0.51
GCN1-209ENST00000551920 MAP7D2Q96T17 732 aa18.26■□□□□ 0.51
GCN1-209ENST00000551920 DDX19AQ9NUU7 478 aaKnown RBP18.26■□□□□ 0.51
GCN1-209ENST00000551920 DBR1Q9UK59 544 aaKnown RBP18.26■□□□□ 0.51
GCN1-209ENST00000551920 AKT3Q9Y243 479 aa18.26■□□□□ 0.51
GCN1-209ENST00000551920 GINS2Q9Y248 185 aa18.26■□□□□ 0.51
GCN1-209ENST00000551920 PPME1Q9Y570 386 aa18.26■□□□□ 0.51
GCN1-209ENST00000551920 MUTP22033 750 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 GPC3P51654 580 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 GRB10Q13322 594 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 SLC39A14Q15043 492 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 LRIT3Q3SXY7 679 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 HYIQ5T013 277 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 KRT79Q5XKE5 535 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 TSHZ1Q6ZSZ6 1077 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 LINC00301Q8NCQ3 95 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 TMEM143Q96AN5 459 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 CLIC6Q96NY7 704 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 NACC1Q96RE7 527 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 OSMRQ99650 979 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 IFIH1Q9BYX4 1025 aaKnown RBP18.25■□□□□ 0.51
GCN1-209ENST00000551920 TFIP11Q9UBB9 837 aaKnown RBP18.25■□□□□ 0.51
GCN1-209ENST00000551920 KIAA1024Q9UPX6 916 aa18.25■□□□□ 0.51
GCN1-209ENST00000551920 MORC2Q9Y6X9 1032 aaPredicted RBP18.25■□□□□ 0.51
GCN1-209ENST00000551920 CHD9Q3L8U1 2897 aa18.24■□□□□ 0.51
GCN1-209ENST00000551920 SZT2Q5T011 3432 aa18.24■□□□□ 0.51
GCN1-209ENST00000551920 EVPLQ92817 2033 aa18.24■□□□□ 0.51
GCN1-209ENST00000551920 M0QZ92 97 aa18.24■□□□□ 0.51
GCN1-209ENST00000551920 USO1O60763 962 aaKnown RBP18.24■□□□□ 0.51
GCN1-209ENST00000551920 XRCC6P12956 609 aaKnown RBP eCLIP18.24■□□□□ 0.51
GCN1-209ENST00000551920 TMOD1P28289 359 aa18.24■□□□□ 0.51
GCN1-209ENST00000551920 CD52P31358 61 aa18.24■□□□□ 0.51
GCN1-209ENST00000551920 NLRP11P59045 1033 aaKnown RBP18.24■□□□□ 0.51
GCN1-209ENST00000551920 USP49Q70CQ1 688 aa18.24■□□□□ 0.51
GCN1-209ENST00000551920 KSR1Q8IVT5 923 aa18.24■□□□□ 0.51
GCN1-209ENST00000551920 AK8Q96MA6 479 aa18.24■□□□□ 0.51
GCN1-209ENST00000551920 CSRNP2Q9H175 543 aa18.24■□□□□ 0.51
GCN1-209ENST00000551920 SUCLA2Q9P2R7 463 aaPredicted RBP18.24■□□□□ 0.51
GCN1-209ENST00000551920 DAXXQ9UER7 740 aaPredicted RBP18.24■□□□□ 0.51
GCN1-209ENST00000551920 ZBBXA8MT70 800 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 GRXCR1A8MXD5 290 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 E9PMD0 336 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 BAIAP3O94812 1187 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 LONP1P36776 959 aaKnown RBP18.23■□□□□ 0.51
GCN1-209ENST00000551920 FXR1P51114 621 aaKnown RBP eCLIP18.23■□□□□ 0.51
GCN1-209ENST00000551920 CRYBB1P53674 252 aaPredicted RBP18.23■□□□□ 0.51
GCN1-209ENST00000551920 WDR5P61964 334 aaKnown RBP18.23■□□□□ 0.51
GCN1-209ENST00000551920 DEFB103AP81534 67 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 DNM1Q05193 864 aaKnown RBP18.23■□□□□ 0.51
GCN1-209ENST00000551920 TMEM119Q4V9L6 283 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 SPECC1Q5M775 1068 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 LINC01599Q8WXQ3 324 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 SEPT8Q92599 483 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 ZNF396Q96N95 335 aaPredicted RBP18.23■□□□□ 0.51
GCN1-209ENST00000551920 PLIN2Q99541 437 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 MTRQ99707 1265 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 BHMT2Q9H2M3 363 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 ATP6V0A4Q9HBG4 840 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 GPRC5CQ9NQ84 441 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 NOC2LQ9Y3T9 749 aaKnown RBP18.23■□□□□ 0.51
GCN1-209ENST00000551920 SRPRBQ9Y5M8 271 aaKnown RBP18.23■□□□□ 0.51
GCN1-209ENST00000551920 STK24Q9Y6E0 443 aa18.23■□□□□ 0.51
GCN1-209ENST00000551920 PTPRSQ13332 1948 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms