RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 KCNG4Q8TDN1 519 aa20.82■□□□□ 0.92
DDX54-209ENST00000551912 CDK5RAP3Q96JB5 506 aa20.82■□□□□ 0.92
DDX54-209ENST00000551912 CLIC6Q96NY7 704 aa20.82■□□□□ 0.92
DDX54-209ENST00000551912 NT5C3AQ9H0P0 336 aa20.82■□□□□ 0.92
DDX54-209ENST00000551912 EVPLQ92817 2033 aa20.82■□□□□ 0.92
DDX54-209ENST00000551912 TANC1Q9C0D5 1861 aa20.81■□□□□ 0.92
DDX54-209ENST00000551912 IGKV6-21A0A0C4DH24 114 aa20.81■□□□□ 0.92
DDX54-209ENST00000551912 M0QZ92 97 aa20.81■□□□□ 0.92
DDX54-209ENST00000551912 DNM2P50570 870 aa20.81■□□□□ 0.92
DDX54-209ENST00000551912 MRPS6P82932 125 aaKnown RBP20.81■□□□□ 0.92
DDX54-209ENST00000551912 FAM26DQ5JW98 314 aa20.81■□□□□ 0.92
DDX54-209ENST00000551912 HYIQ5T013 277 aa20.81■□□□□ 0.92
DDX54-209ENST00000551912 LINC01465Q8N7H1 131 aa20.81■□□□□ 0.92
DDX54-209ENST00000551912 CALML4Q96GE6 196 aa20.81■□□□□ 0.92
DDX54-209ENST00000551912 MAP7D2Q96T17 732 aa20.81■□□□□ 0.92
DDX54-209ENST00000551912 DHX33Q9H6R0 707 aaKnown RBP20.81■□□□□ 0.92
DDX54-209ENST00000551912 DNM3Q9UQ16 869 aa20.81■□□□□ 0.92
DDX54-209ENST00000551912 CHRNA1P02708 482 aa20.8■□□□□ 0.92
DDX54-209ENST00000551912 TMEM62Q0P6H9 643 aa20.8■□□□□ 0.92
DDX54-209ENST00000551912 SPECC1Q5M775 1068 aa20.8■□□□□ 0.92
DDX54-209ENST00000551912 CHRDL2Q6WN34 429 aa20.8■□□□□ 0.92
DDX54-209ENST00000551912 RPUSD2Q8IZ73 545 aaKnown RBP20.8■□□□□ 0.92
DDX54-209ENST00000551912 KCTD17Q8N5Z5 321 aa20.8■□□□□ 0.92
DDX54-209ENST00000551912 RASSF8Q8NHQ8 419 aa20.8■□□□□ 0.92
DDX54-209ENST00000551912 UBE2OQ9C0C9 1292 aaKnown RBP20.8■□□□□ 0.92
DDX54-209ENST00000551912 CCSER1Q9C0I3 900 aa20.8■□□□□ 0.92
DDX54-209ENST00000551912 IL23AQ9NPF7 189 aa20.8■□□□□ 0.92
DDX54-209ENST00000551912 RCOR1Q9UKL0 485 aa20.8■□□□□ 0.92
DDX54-209ENST00000551912 AKT3Q9Y243 479 aa20.8■□□□□ 0.92
DDX54-209ENST00000551912 CDY2AQ9Y6F7 541 aa20.8■□□□□ 0.92
DDX54-209ENST00000551912 ARID2Q68CP9 1835 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 ARHGEF35A5YM69 484 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 GAS2O43903 313 aaKnown RBP20.79■□□□□ 0.92
DDX54-209ENST00000551912 CUTAO60888 179 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 DGAT1O75907 488 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 VTNP04004 478 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 PFKMP08237 780 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 BMP8BP34820 402 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 TXLNAP40222 546 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 MGAT3Q09327 533 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 GRB10Q13322 594 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 EMC2Q15006 297 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 DEFB128Q7Z7B8 93 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 SYMPKQ92797 1274 aaKnown RBP20.79■□□□□ 0.92
DDX54-209ENST00000551912 EPSTI1Q96J88 318 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 PNMA5Q96PV4 448 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 PLIN2Q99541 437 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 MTRQ99707 1265 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 BMP2KQ9NSY1 1161 aaPredicted RBP20.79■□□□□ 0.92
DDX54-209ENST00000551912 TRPV2Q9Y5S1 764 aa20.79■□□□□ 0.92
DDX54-209ENST00000551912 E9PMD0 336 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 NBNO60934 754 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 EYA4O95677 639 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 ACRP10323 421 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 ME1P48163 572 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 EPHB4P54760 987 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 MKRN4PQ13434 485 aaPredicted RBP20.78■□□□□ 0.92
DDX54-209ENST00000551912 DRP2Q13474 957 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 MBTPS1Q14703 1052 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 GPNMBQ14956 572 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 TMEM119Q4V9L6 283 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 ZNF710Q8N1W2 664 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 CHAMP1Q96JM3 812 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 CELF4Q9BZC1 486 aaKnown RBP20.78■□□□□ 0.92
DDX54-209ENST00000551912 SCAND2PQ9GZW5 306 aaPredicted RBP20.78■□□□□ 0.92
DDX54-209ENST00000551912 BHMT2Q9H2M3 363 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 ATP6V0A4Q9HBG4 840 aa20.78■□□□□ 0.92
DDX54-209ENST00000551912 SUCLA2Q9P2R7 463 aaPredicted RBP20.78■□□□□ 0.92
DDX54-209ENST00000551912 SCN5AQ14524 2016 aa20.77■□□□□ 0.92
DDX54-209ENST00000551912 USO1O60763 962 aaKnown RBP20.77■□□□□ 0.92
DDX54-209ENST00000551912 CXCL10P02778 98 aa20.77■□□□□ 0.92
DDX54-209ENST00000551912 KARSQ15046 597 aaKnown RBP20.77■□□□□ 0.92
DDX54-209ENST00000551912 PSRC1Q6PGN9 363 aaPredicted RBP20.77■□□□□ 0.92
DDX54-209ENST00000551912 PADI6Q6TGC4 694 aa20.77■□□□□ 0.92
DDX54-209ENST00000551912 USP49Q70CQ1 688 aa20.77■□□□□ 0.92
DDX54-209ENST00000551912 KCNK18Q7Z418 384 aa20.77■□□□□ 0.92
DDX54-209ENST00000551912 TCP11Q8WWU5 503 aa20.77■□□□□ 0.92
DDX54-209ENST00000551912 SPATA32Q96LK8 384 aa20.77■□□□□ 0.92
DDX54-209ENST00000551912 CHMP5Q9NZZ3 219 aa20.77■□□□□ 0.92
DDX54-209ENST00000551912 CCDC39Q9UFE4 941 aa20.77■□□□□ 0.92
DDX54-209ENST00000551912 GINS2Q9Y248 185 aa20.77■□□□□ 0.92
DDX54-209ENST00000551912 RANBP2P49792 3224 aaKnown RBP20.77■□□□□ 0.92
DDX54-209ENST00000551912 NLRP11P59045 1033 aaKnown RBP20.76■□□□□ 0.91
DDX54-209ENST00000551912 CDC42EP1Q00587 391 aa20.76■□□□□ 0.91
DDX54-209ENST00000551912 KIZQ2M2Z5 673 aa20.76■□□□□ 0.91
DDX54-209ENST00000551912 AXDND1Q5T1B0 1012 aaPredicted RBP20.76■□□□□ 0.91
DDX54-209ENST00000551912 C16orf59Q7L2K0 433 aa20.76■□□□□ 0.91
DDX54-209ENST00000551912 MCPH1Q8NEM0 835 aa20.76■□□□□ 0.91
DDX54-209ENST00000551912 LEO1Q8WVC0 666 aaPredicted RBP20.76■□□□□ 0.91
DDX54-209ENST00000551912 PSPC1Q8WXF1 523 aaKnown RBP20.76■□□□□ 0.91
DDX54-209ENST00000551912 TMEM143Q96AN5 459 aa20.76■□□□□ 0.91
DDX54-209ENST00000551912 VWCEQ96DN2 955 aa20.76■□□□□ 0.91
DDX54-209ENST00000551912 IPO9Q96P70 1041 aaKnown RBP20.76■□□□□ 0.91
DDX54-209ENST00000551912 PPP1R16BQ96T49 567 aa20.76■□□□□ 0.91
DDX54-209ENST00000551912 PRO3102Q9H379 93 aa20.76■□□□□ 0.91
DDX54-209ENST00000551912 XPNPEP1Q9NQW7 623 aa20.76■□□□□ 0.91
DDX54-209ENST00000551912 PCDHA7Q9UN72 937 aa20.76■□□□□ 0.91
DDX54-209ENST00000551912 LOXHD1Q8IVV2 1947 aa20.75■□□□□ 0.91
DDX54-209ENST00000551912 GPR32O75388 356 aa20.75■□□□□ 0.91
DDX54-209ENST00000551912 GHRP10912 638 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms