RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PPT2Q9UMR5 302 aa6.89□□□□□ -1.31
SCAF11-213ENST00000550629 PSME4Q14997 1843 aa6.89□□□□□ -1.31
SCAF11-213ENST00000550629 AKAP11Q9UKA4 1901 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 SBF1O95248 1867 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 ZNF541Q9H0D2 1346 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 FAM86C2PA6NEL3 165 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 GLTPD2A6NH11 291 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 NFIBO00712 420 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 LDHCP07864 332 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 ZGLP1P0C6A0 271 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 ACRP10323 421 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 IMPDH2P12268 514 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 GSPT1P15170 499 aaKnown RBP6.88□□□□□ -1.31
SCAF11-213ENST00000550629 SDSP20132 328 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 RGS3P49796 1198 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 ZNF280AP59817 542 aaPredicted RBP6.88□□□□□ -1.31
SCAF11-213ENST00000550629 TEKQ02763 1124 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 UBE3CQ15386 1083 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 HHIPL2Q6UWX4 724 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 DZIP1Q86YF9 867 aaKnown RBP6.88□□□□□ -1.31
SCAF11-213ENST00000550629 CILP2Q8IUL8 1156 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 NSUN4Q96CB9 384 aaKnown RBP6.88□□□□□ -1.31
SCAF11-213ENST00000550629 ABCF2Q9UG63 623 aa6.88□□□□□ -1.31
SCAF11-213ENST00000550629 ZNF646O15015 1829 aaPredicted RBP6.87□□□□□ -1.31
SCAF11-213ENST00000550629 MAST2Q6P0Q8 1798 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 GAKO14976 1311 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 IQCA1LA6NCM1 817 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 RNF113AO15541 343 aaKnown RBP6.87□□□□□ -1.31
SCAF11-213ENST00000550629 EIF5BO60841 1220 aaKnown RBP6.87□□□□□ -1.31
SCAF11-213ENST00000550629 IDH1O75874 414 aaKnown RBP6.87□□□□□ -1.31
SCAF11-213ENST00000550629 HPXP02790 462 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 RAC2P15153 192 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 PDE6AP16499 860 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 PRDX5P30044 214 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 GMPSP49915 693 aaPredicted RBP6.87□□□□□ -1.31
SCAF11-213ENST00000550629 MECOMQ03112 1051 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 SLC9C2Q5TAH2 1124 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 FBXW10Q5XX13 1052 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 NAA16Q6N069 864 aaPredicted RBP6.87□□□□□ -1.31
SCAF11-213ENST00000550629 CASC1Q6TDU7 716 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 NT5DC4Q86YG4 428 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 DAGLBQ8NCG7 672 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 ABHD4Q8TB40 342 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 MYLIPQ8WY64 445 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 TEKT1Q969V4 418 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 ZDHHC15Q96MV8 337 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 DIRC2Q96SL1 478 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 FSD1Q9BTV5 496 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 PRDM14Q9GZV8 571 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 NSUN3Q9H649 340 aaKnown RBP6.87□□□□□ -1.31
SCAF11-213ENST00000550629 SP110Q9HB58 689 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 GINM1Q9NU53 330 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 GPRC5DQ9NZD1 345 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 RAI14Q9P0K7 980 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 EBF1Q9UH73 591 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 HDAC9Q9UKV0 1011 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 SCN9AQ15858 1988 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 DOCK2Q92608 1830 aa6.87□□□□□ -1.31
SCAF11-213ENST00000550629 MYH13Q9UKX3 1938 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 MROH7-TTC4A0A0A0MT08 1334 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 RAD50Q92878 1312 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 GPR75-ASB3A0A0A6YYF3 556 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 TCRBV5S4A2TA0A5A2 114 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 H7C1D1 291 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 PRAMEF1O95521 474 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 BAG3O95817 575 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 ZSCAN22P10073 491 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-213ENST00000550629 TRHRP34981 398 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-213ENST00000550629 ADD2P35612 726 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 SKAP1Q86WV1 359 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 ZNF655Q8N720 491 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-213ENST00000550629 MAGEB6Q8N7X4 407 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 FBXO15Q8NCQ5 510 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-213ENST00000550629 PDZD8Q8NEN9 1154 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 ZNF384Q8TF68 577 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 RUFY2Q8WXA3 655 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 DHX38Q92620 1227 aaKnown RBP6.86□□□□□ -1.31
SCAF11-213ENST00000550629 APPBP2Q92624 585 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 RILPL2Q969X0 211 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 EDC3Q96F86 508 aaKnown RBP6.86□□□□□ -1.31
SCAF11-213ENST00000550629 TCTN2Q96GX1 697 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 ZBED3Q96IU2 234 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-213ENST00000550629 MKRN2Q9H000 416 aaKnown RBP6.86□□□□□ -1.31
SCAF11-213ENST00000550629 HELLSQ9NRZ9 838 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 DIAPH3Q9NSV4 1193 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 CNOT7Q9UIV1 285 aaKnown RBP6.86□□□□□ -1.31
SCAF11-213ENST00000550629 JAG2Q9Y219 1238 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.86□□□□□ -1.31
SCAF11-213ENST00000550629 ZNF281Q9Y2X9 895 aa6.86□□□□□ -1.31
SCAF11-213ENST00000550629 WDR90Q96KV7 1748 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 ZNF532Q9HCE3 1301 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 SIGLEC6O43699 453 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 CDC45O75419 566 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 DDNO94850 711 aaPredicted RBP6.85□□□□□ -1.31
SCAF11-213ENST00000550629 CHMLP26374 656 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 DLGAP5Q15398 846 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 FKBP1CQ5VVH2 108 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 CCDC81Q6ZN84 652 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 RUFY4Q6ZNE9 571 aa6.85□□□□□ -1.31
SCAF11-213ENST00000550629 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms