RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 S100ZQ8WXG8 99 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 PRPF18Q99633 342 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 GOLPH3LQ9H4A5 285 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 DMTF1Q9Y222 760 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 ARHGAP5Q13017 1502 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 PDE6AP16499 860 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 GJC1P36383 396 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 KIF22Q14807 665 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 ZNF174Q15697 407 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 C1orf228Q6PIY5 440 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 RBM43Q6ZSC3 357 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 SCG3Q8WXD2 468 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 OLFM1Q99784 485 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 APOL4Q9BPW4 351 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 TMEM165Q9HC07 324 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 HMG20AQ9NP66 347 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 SMAPO00193 183 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 OATP04181 439 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 HOXB7P09629 217 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 XRCC5P13010 732 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 IL12RB1P42701 662 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 HAND2P61296 217 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 HADHQ16836 314 aaKnown RBP9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 TCHHL1Q5QJ38 904 aaPredicted RBP9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 RABGAP1LQ5R372 815 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 ZMYM1Q5SVZ6 1142 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 OTUD6AQ7L8S5 288 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 CABP7Q86V35 215 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 MAP4K1Q92918 833 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 SPATA17Q96L03 361 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 ZNF184Q99676 751 aaPredicted RBP9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 MPP6Q9NZW5 540 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 FAM153AQ9UHL3 310 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 TLK1Q9UKI8 766 aa9.38□□□□□ -0.91
PPFIA2-220ENST00000550584 SOS2Q07890 1332 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 CARMIL3Q8ND23 1372 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 TRHP20396 242 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 CDH3P22223 829 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 EPS8Q12929 822 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 C15orf59Q2T9L4 293 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 CDH24Q86UP0 819 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 ANKLE2Q86XL3 938 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 C1orf131Q8NDD1 294 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 GRPEL2Q8TAA5 225 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 MRRFQ96E11 262 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 MCRS1Q96EZ8 462 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 CEP72Q9P209 647 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 KCNG1Q9UIX4 513 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 FBXO2Q9UK22 296 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 PALD1Q9ULE6 856 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 KPNA7A9QM74 516 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 CAPN9O14815 690 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 RPL5P46777 297 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 PURAQ00577 322 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 IFIT5Q13325 482 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 XRCC4Q13426 336 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 PPP6R3Q5H9R7 873 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 TRAPPC11Q7Z392 1133 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 NCAPG2Q86XI2 1143 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 BEST2Q8NFU1 509 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 SCFD1Q8WVM8 642 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 CNKSR1Q969H4 720 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 DGCR14Q96DF8 476 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 ERP27Q96DN0 273 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 COX4I2Q96KJ9 171 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 B3GALT6Q96L58 329 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 METTL5Q9NRN9 209 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 A0A1B0GTH6 734 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 GFPT2O94808 682 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 PGM3O95394 542 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 PSMC3P17980 439 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 RFC5P40937 340 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 BFSP1Q12934 665 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 MLECQ14165 292 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 KRT31Q15323 416 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 TTC27Q6P3X3 843 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 ZNF530Q6P9A1 599 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 LPCAT2Q7L5N7 544 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 STX12Q86Y82 276 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 ATP8B4Q8TF62 1192 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 MMS19Q96T76 1030 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 COPG2Q9UBF2 871 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 CLIC4Q9Y696 253 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 CDC27P30260 824 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 ARL1P40616 181 aaPredicted RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 NAPAP54920 295 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 ADCY1Q08828 1119 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 CYTH1Q15438 398 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 DTX3LQ8TDB6 740 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 NMD3Q96D46 503 aaKnown RBP9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 GIN1Q9NXP7 522 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 MAP3K2Q9Y2U5 619 aa9.37□□□□□ -0.91
PPFIA2-220ENST00000550584 ARHGEF10O15013 1369 aa9.36□□□□□ -0.91
PPFIA2-220ENST00000550584 SYNMO15061 1565 aa9.36□□□□□ -0.91
PPFIA2-220ENST00000550584 CFAP69A5D8W1 941 aa9.36□□□□□ -0.91
PPFIA2-220ENST00000550584 FAM47DPA6NHR8 397 aa9.36□□□□□ -0.91
PPFIA2-220ENST00000550584 ZBBXA8MT70 800 aa9.36□□□□□ -0.91
PPFIA2-220ENST00000550584 COPEO14579 308 aa9.36□□□□□ -0.91
PPFIA2-220ENST00000550584 CDH16O75309 829 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms