RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TCF15Q12870 199 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 DSC3Q14574 896 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 SPOUT1Q5T280 376 aaKnown RBP11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 FAM160B1Q5W0V3 765 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 TYW1BQ6NUM6 668 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 PPP1R18Q6NYC8 613 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 COLGALT1Q8NBJ5 622 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 SPRYD3Q8NCJ5 442 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 TMEM40Q8WWA1 233 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 ASIC4Q96FT7 647 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 RPGRIP1Q96KN7 1286 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 PHOX2BQ99453 314 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 LSG1Q9H089 658 aaKnown RBP11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 GLT8D2Q9H1C3 349 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 CWH43Q9H720 699 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 ATP6V0A4Q9HBG4 840 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 TMEM161AQ9NX61 479 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 TMEM260Q9NX78 707 aa11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 PUF60Q9UHX1 559 aaKnown RBP11.22□□□□□ -0.61
TRAFD1-207ENST00000550051 KMT2EQ8IZD2 1858 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 TBKBP1A7MCY6 615 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 hCG_1984214I3L0E3 225 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 ST18O60284 1047 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 GPR32O75388 356 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 HOXB8P17481 243 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 LAG3P18627 525 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 ATP4AP20648 1035 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 AVPR2P30518 371 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 AP3B2Q13367 1082 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 PTPN21Q16825 1174 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 WWC2Q6AWC2 1192 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 PDXDC2PQ6P474 469 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 SYNE3Q6ZMZ3 975 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 ZNF710Q8N1W2 664 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 ZNF713Q8N859 430 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 CRYGNQ8WXF5 182 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 MRPS27Q92552 414 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 NGRNQ9NPE2 291 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 ZNF302Q9NR11 478 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 RBM28Q9NW13 759 aaKnown RBP11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 GINS2Q9Y248 185 aa11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 MAFBQ9Y5Q3 323 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 V9GY48 417 aaPredicted RBP11.21□□□□□ -0.61
TRAFD1-207ENST00000550051 MYO10Q9HD67 2058 aa11.21□□□□□ -0.62
TRAFD1-207ENST00000550051 SMCO2A6NFE2 343 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 BACH1O14867 736 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 CYP3A4P08684 503 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 SRGAP2BP0DMP2 458 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 ZNF76P36508 570 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 ADCY7P51828 1080 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 NAPAP54920 295 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 RBM10P98175 930 aaKnown RBP11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 CREB3L3Q68CJ9 461 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 SWSAP1Q6NVH7 229 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 ANKRD54Q6NXT1 300 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 MIS18BP1Q6P0N0 1132 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 SYCE2Q6PIF2 218 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 APOA5Q6Q788 366 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 LRRC55Q6ZSA7 311 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 FAM228AQ86W67 206 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 CCDC60Q8IWA6 550 aaPredicted RBP11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 THNSL1Q8IYQ7 743 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 ANO3Q9BYT9 981 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 TMEM117Q9H0C3 514 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 TBC1D22BQ9NU19 505 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 BARHL2Q9NY43 387 aa11.2□□□□□ -0.62
TRAFD1-207ENST00000550051 WDR81Q562E7 1941 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 CNTNAP5Q8WYK1 1306 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 IGLV3-22A0A075B6J6 115 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 FAM86B1E9PN63 330 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 IPO5O00410 1097 aaKnown RBP11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 MAGEB2O15479 319 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 HOXA2O43364 376 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 C22orf31O95567 290 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 FAM86B2P0C5J1 330 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 FGFR1P11362 822 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 TECP42680 631 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 EXOSC10Q01780 885 aaKnown RBP11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 KRT17Q04695 432 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 KIZQ2M2Z5 673 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 MCTP2Q6DN12 878 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 ZNF746Q6NUN9 644 aaPredicted RBP11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 KCNT2Q6UVM3 1135 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 MICU3Q86XE3 530 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 PLA2G4DQ86XP0 818 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 RAB11FIP4Q86YS3 637 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 MRPL43Q8N983 215 aaKnown RBP11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 PGBD1Q96JS3 809 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 RIPOR3Q96MK2 946 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 CASD1Q96PB1 797 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 TCF25Q9BQ70 676 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 ESYT1Q9BSJ8 1104 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 LRRC2Q9BYS8 371 aa11.19□□□□□ -0.62
TRAFD1-207ENST00000550051 USP34Q70CQ2 3546 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 EOMESO95936 686 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 PPM1AP35813 382 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 PSEN1P49768 467 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 TSGA10IPQ3SY00 556 aa11.18□□□□□ -0.62
TRAFD1-207ENST00000550051 CKAP2LQ8IYA6 745 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms