RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 TLDC2A0PJX2 215 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 DCDC2CA8MYV0 355 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 HMGB1P1B2RPK0 211 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 PDXKO00764 312 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 BUB1BO60566 1050 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 HSPA9P38646 679 aaKnown RBP12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 USP8P40818 1118 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 APOBEC3HQ6NTF7 200 aaKnown RBP12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 ARHGAP27Q6ZUM4 889 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 MYCBPAPQ8TBZ2 947 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 SCFD2Q8WU76 684 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 LRRC45Q96CN5 670 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 AMFRQ9UKV5 643 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 ECHS1P30084 290 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 ITGB3BPQ13352 177 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 VPS72Q15906 364 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 TMBIM4Q9HC24 238 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 LRRC4CQ9HCJ2 640 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 SIX2Q9NPC8 291 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 PLCB1Q9NQ66 1216 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 DNAJC12Q9UKB3 198 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 FRMD3A2A2Y4 597 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 DDX39AO00148 427 aaKnown RBP12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 KRT13P13646 458 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 CRKP46108 304 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 ZNF844Q08AG5 666 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 DRAP1Q14919 205 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 MREGQ8N565 214 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 LNX1Q8TBB1 728 aaPredicted RBP12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 SLC35G2Q8TBE7 412 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 LMBR1Q8WVP7 490 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 COA1Q9GZY4 146 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 TMOD4Q9NZQ9 345 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 PPP1R9AQ9ULJ8 1098 aa12.98□□□□□ -0.33
RAPGEF3-219ENST00000549151 MEFVO15553 781 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 PPP1R12BO60237 982 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 AADACL2Q6P093 401 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 FOXR2Q6PJQ5 311 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 MMS22LQ6ZRQ5 1243 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 CTNNBL1Q8WYA6 563 aaPredicted RBP12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 GLG1Q92896 1179 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 DYDC2Q96IM9 177 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 TMEM59LQ9UK28 342 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 IGSF9BQ9UPX0 1349 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 MAGOHP61326 146 aaKnown RBP12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 CUL1Q13616 776 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 C10orf76Q5T2E6 689 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 DPY19L2P1Q6NXN4 242 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 PALB2Q86YC2 1186 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 CCDC26Q8TAB7 109 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 ACTRT1Q8TDG2 376 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 MAGOHBQ96A72 148 aaKnown RBP12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 LENG9Q96B70 501 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 METTL14Q9HCE5 456 aaKnown RBP12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 TAS2R14Q9NYV8 317 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 UTP11Q9Y3A2 253 aaKnown RBP12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 COL24A1Q17RW2 1714 aa12.97□□□□□ -0.33
RAPGEF3-219ENST00000549151 TGFB1I1O43294 461 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 NDUFB10O96000 172 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 HNRNPH1P31943 449 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 ZYXQ15942 572 aaKnown RBP12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 RINT1Q6NUQ1 792 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 CCDC174Q6PII3 467 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 NT5DC3Q86UY8 548 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 SYCP3Q8IZU3 236 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 MDM1Q8TC05 714 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 SH2D3AQ9BRG2 576 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 SMCHD1A6NHR9 2005 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 CBWD6Q4V339 395 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 CBWD3Q5JTY5 395 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 CBWD5Q5RIA9 395 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 ZNF746Q6NUN9 644 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 ARHGEF26Q96DR7 871 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 CCDC17Q96LX7 622 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 GLT8D2Q9H1C3 349 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 PCIF1Q9H4Z3 704 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 BTAF1O14981 1849 aa12.96□□□□□ -0.33
RAPGEF3-219ENST00000549151 ARFGEF1Q9Y6D6 1849 aa12.96□□□□□ -0.34
RAPGEF3-219ENST00000549151 FERP16591 822 aa12.96□□□□□ -0.34
RAPGEF3-219ENST00000549151 TNFAIP3P21580 790 aa12.96□□□□□ -0.34
RAPGEF3-219ENST00000549151 PSMC2P35998 433 aaKnown RBP12.96□□□□□ -0.34
RAPGEF3-219ENST00000549151 AP3B2Q13367 1082 aa12.96□□□□□ -0.34
RAPGEF3-219ENST00000549151 SF3B2Q13435 895 aaKnown RBP12.96□□□□□ -0.34
RAPGEF3-219ENST00000549151 MICALCLQ6ZW33 695 aa12.96□□□□□ -0.34
RAPGEF3-219ENST00000549151 EPM2AIP1Q7L775 607 aaPredicted RBP12.96□□□□□ -0.34
RAPGEF3-219ENST00000549151 ARFGAP2Q8N6H7 521 aa12.96□□□□□ -0.34
RAPGEF3-219ENST00000549151 HOOK2Q96ED9 719 aa12.96□□□□□ -0.34
RAPGEF3-219ENST00000549151 AHDC1Q5TGY3 1603 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-219ENST00000549151 CYP3A7-CYP3A51PA0A087WV96 503 aa12.95□□□□□ -0.34
RAPGEF3-219ENST00000549151 A6NNZ2 444 aa12.95□□□□□ -0.34
RAPGEF3-219ENST00000549151 GH2P01242 217 aa12.95□□□□□ -0.34
RAPGEF3-219ENST00000549151 CYP3A7P24462 503 aa12.95□□□□□ -0.34
RAPGEF3-219ENST00000549151 HOXA7P31268 230 aaPredicted RBP12.95□□□□□ -0.34
RAPGEF3-219ENST00000549151 PLTPP55058 493 aa12.95□□□□□ -0.34
RAPGEF3-219ENST00000549151 TUBB8Q3ZCM7 444 aa12.95□□□□□ -0.34
RAPGEF3-219ENST00000549151 SYDE2Q5VT97 1194 aa12.95□□□□□ -0.34
RAPGEF3-219ENST00000549151 HS2ST1Q7LGA3 356 aa12.95□□□□□ -0.34
RAPGEF3-219ENST00000549151 FAM178BQ8IXR5 827 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms