RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 GHRP10912 638 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 EZRP15311 586 aaKnown RBP14.92□□□□□ -0.02
HDAC7-228ENST00000548938 CHN1P15882 459 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 BTDP43251 543 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 CLEC10AQ8IUN9 316 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 CCDC197Q8NCU1 140 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 MAGEC3Q8TD91 643 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 P3H4Q92791 437 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 ZNF317Q96PQ6 595 aaPredicted RBP14.92□□□□□ -0.02
HDAC7-228ENST00000548938 SELENOSQ9BQE4 189 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 GPCPD1Q9NPB8 672 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 OSGEPQ9NPF4 335 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 KDM3AQ9Y4C1 1321 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 CCT8L1PA6NM43 557 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 PPP1R11O60927 126 aaPredicted RBP14.92□□□□□ -0.02
HDAC7-228ENST00000548938 EIF6P56537 245 aaKnown RBP14.92□□□□□ -0.02
HDAC7-228ENST00000548938 GSTO1P78417 241 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 ELF3P78545 371 aaPredicted RBP14.92□□□□□ -0.02
HDAC7-228ENST00000548938 ARSHQ5FYA8 562 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 DCAF12L1Q5VU92 463 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 MSL1Q68DK7 614 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 PPP4R3CPQ6ZMV5 832 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 LMBR1Q8WVP7 490 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 SIX2Q9NPC8 291 aa14.92□□□□□ -0.02
HDAC7-228ENST00000548938 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.92□□□□□ -0.02
HDAC7-228ENST00000548938 PPIP5K2O43314 1243 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 BUB1BO60566 1050 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-228ENST00000548938 MMEP08473 750 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 RXRBP28702 533 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 PRPF4BQ13523 1007 aaKnown RBP14.91□□□□□ -0.02
HDAC7-228ENST00000548938 EPHA7Q15375 998 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 TCERG1LQ5VWI1 586 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 HIBCHQ6NVY1 386 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-228ENST00000548938 SYCE1Q8N0S2 351 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 AKT1S1Q96B36 256 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 GPR101Q96P66 508 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-228ENST00000548938 GOPCQ9HD26 462 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 KIF13BQ9NQT8 1826 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 A0A0A6YYK5 440 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-228ENST00000548938 POTEFA5A3E0 1075 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 SMIM23A6NLE4 172 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 POTEIP0CG38 1075 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 XRCC5P13010 732 aaKnown RBP14.91□□□□□ -0.02
HDAC7-228ENST00000548938 STAT3P40763 770 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 GALCP54803 685 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 EIF3BP55884 814 aaKnown RBP14.91□□□□□ -0.02
HDAC7-228ENST00000548938 JAM2P57087 298 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 PPP1R7Q15435 360 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 POTEGQ6S5H5 508 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 POTEEQ6S8J3 1075 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 FRMD5Q7Z6J6 570 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 HOOK3Q86VS8 718 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 COL23A1Q86Y22 540 aaPredicted RBP14.91□□□□□ -0.02
HDAC7-228ENST00000548938 TEX11Q8IYF3 940 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 MIEF2Q96C03 454 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 ERVK-5Q9HDB9 667 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 ZDHHC18Q9NUE0 388 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 AMFRQ9UKV5 643 aa14.91□□□□□ -0.02
HDAC7-228ENST00000548938 IGSF9BQ9UPX0 1349 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 FRMD3A2A2Y4 597 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 SPDYE3A6NKU9 549 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 AKAP3O75969 853 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 GFPT2O94808 682 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 ATP6V1G2O95670 118 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 HOXD13P35453 343 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 MRPL12P52815 198 aaKnown RBP14.9□□□□□ -0.02
HDAC7-228ENST00000548938 UBAP2Q5T6F2 1119 aaKnown RBP14.9□□□□□ -0.02
HDAC7-228ENST00000548938 VPS36Q86VN1 386 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 LNX1Q8TBB1 728 aaPredicted RBP14.9□□□□□ -0.02
HDAC7-228ENST00000548938 ATXN2LQ8WWM7 1075 aaKnown RBP14.9□□□□□ -0.02
HDAC7-228ENST00000548938 CENPTQ96BT3 561 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 MTFR1LQ9H019 292 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 ADAM7Q9H2U9 754 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 GCNT4Q9P109 453 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 PPP1R9AQ9ULJ8 1098 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 TLDC2A0PJX2 215 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 MED24O75448 989 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 ECM2O94769 699 aaPredicted RBP14.9□□□□□ -0.02
HDAC7-228ENST00000548938 SLC8A1P32418 973 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 CLK2P49760 499 aaKnown RBP14.9□□□□□ -0.02
HDAC7-228ENST00000548938 PTENP60484 403 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 DR1Q01658 176 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 OLIG1Q8TAK6 271 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 GLG1Q92896 1179 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 TBC1D31Q96DN5 1066 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 RAB17Q9H0T7 212 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 NOD2Q9HC29 1040 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 BAIAP2L1Q9UHR4 511 aa14.9□□□□□ -0.02
HDAC7-228ENST00000548938 DDX3YO15523 660 aaKnown RBP14.89□□□□□ -0.03
HDAC7-228ENST00000548938 NOVP48745 357 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 CASP4P49662 377 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 GPSM2P81274 684 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 DUPD1Q68J44 220 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 TAX1BP1Q86VP1 789 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 SFR1Q86XK3 245 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 LRRC34Q8IZ02 419 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 NEK9Q8TD19 979 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 DHX36Q9H2U1 1008 aaKnown RBP14.89□□□□□ -0.03
HDAC7-228ENST00000548938 JMJD4Q9H9V9 463 aa14.89□□□□□ -0.03
HDAC7-228ENST00000548938 ATP6V0A4Q9HBG4 840 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms