RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 FOXL1Q12952 345 aa6.17□□□□□ -1.42
CCDC38-206ENST00000548771 FOXE3Q13461 319 aa6.17□□□□□ -1.42
CCDC38-206ENST00000548771 TMEM132BQ14DG7 1078 aa6.17□□□□□ -1.42
CCDC38-206ENST00000548771 ARHGAP44Q17R89 818 aa6.17□□□□□ -1.42
CCDC38-206ENST00000548771 FILIP1Q7Z7B0 1213 aa6.17□□□□□ -1.42
CCDC38-206ENST00000548771 GPR135Q8IZ08 494 aa6.17□□□□□ -1.42
CCDC38-206ENST00000548771 FOXB1Q99853 325 aa6.17□□□□□ -1.42
CCDC38-206ENST00000548771 PUF60Q9UHX1 559 aaKnown RBP6.17□□□□□ -1.42
CCDC38-206ENST00000548771 TRAF5O00463 557 aa6.16□□□□□ -1.42
CCDC38-206ENST00000548771 GLRX3O76003 335 aaKnown RBP6.16□□□□□ -1.42
CCDC38-206ENST00000548771 RAPGEF3O95398 923 aa6.16□□□□□ -1.42
CCDC38-206ENST00000548771 APEX1P27695 318 aaKnown RBP6.16□□□□□ -1.42
CCDC38-206ENST00000548771 RPS19P39019 145 aaKnown RBP6.16□□□□□ -1.42
CCDC38-206ENST00000548771 FNTBP49356 437 aa6.16□□□□□ -1.42
CCDC38-206ENST00000548771 ZCCHC8Q6NZY4 707 aaKnown RBP6.16□□□□□ -1.42
CCDC38-206ENST00000548771 RNF207Q6ZRF8 634 aa6.16□□□□□ -1.42
CCDC38-206ENST00000548771 OTOP2Q7RTS6 562 aa6.16□□□□□ -1.42
CCDC38-206ENST00000548771 HIPK4Q8NE63 616 aa6.16□□□□□ -1.42
CCDC38-206ENST00000548771 NELFAQ9H3P2 528 aa6.16□□□□□ -1.42
CCDC38-206ENST00000548771 AGO3Q9H9G7 860 aaKnown RBP6.16□□□□□ -1.42
CCDC38-206ENST00000548771 KANSL2Q9H9L4 492 aa6.16□□□□□ -1.42
CCDC38-206ENST00000548771 VWA7Q9Y334 891 aa6.16□□□□□ -1.42
CCDC38-206ENST00000548771 HIP1RO75146 1068 aa6.15□□□□□ -1.42
CCDC38-206ENST00000548771 DNAJC8O75937 253 aaPredicted RBP6.15□□□□□ -1.42
CCDC38-206ENST00000548771 ACO1P21399 889 aaKnown RBP6.15□□□□□ -1.42
CCDC38-206ENST00000548771 STAT5BP51692 787 aa6.15□□□□□ -1.42
CCDC38-206ENST00000548771 CALML6Q8TD86 181 aa6.15□□□□□ -1.42
CCDC38-206ENST00000548771 C16orf92Q96LL3 132 aa6.15□□□□□ -1.42
CCDC38-206ENST00000548771 DNAJC2Q99543 621 aaKnown RBP6.15□□□□□ -1.42
CCDC38-206ENST00000548771 PLA2G3Q9NZ20 509 aa6.15□□□□□ -1.42
CCDC38-206ENST00000548771 CTDP1Q9Y5B0 961 aaPredicted RBP6.15□□□□□ -1.42
CCDC38-206ENST00000548771 B4E1Z4 1266 aa6.14□□□□□ -1.43
CCDC38-206ENST00000548771 M0R2C6 588 aa6.14□□□□□ -1.43
CCDC38-206ENST00000548771 PRLP01236 227 aa6.14□□□□□ -1.43
CCDC38-206ENST00000548771 ASLP04424 464 aa6.14□□□□□ -1.43
CCDC38-206ENST00000548771 APPP05067 770 aa6.14□□□□□ -1.43
CCDC38-206ENST00000548771 IGFALSP35858 605 aa6.14□□□□□ -1.43
CCDC38-206ENST00000548771 USP51Q70EK9 711 aa6.14□□□□□ -1.43
CCDC38-206ENST00000548771 CHST14Q8NCH0 376 aa6.14□□□□□ -1.43
CCDC38-206ENST00000548771 SREK1Q8WXA9 508 aaKnown RBP6.14□□□□□ -1.43
CCDC38-206ENST00000548771 EXTL1Q92935 676 aa6.14□□□□□ -1.43
CCDC38-206ENST00000548771 OR14A2Q96R54 314 aa6.14□□□□□ -1.43
CCDC38-206ENST00000548771 SAMD15Q9P1V8 674 aa6.14□□□□□ -1.43
CCDC38-206ENST00000548771 RFPL3O75679 317 aa6.13□□□□□ -1.43
CCDC38-206ENST00000548771 MEOX1P50221 254 aa6.13□□□□□ -1.43
CCDC38-206ENST00000548771 ADCY7P51828 1080 aa6.13□□□□□ -1.43
CCDC38-206ENST00000548771 ANTXR2P58335 489 aa6.13□□□□□ -1.43
CCDC38-206ENST00000548771 ADAM8P78325 824 aa6.13□□□□□ -1.43
CCDC38-206ENST00000548771 NFE2L2Q16236 605 aa6.13□□□□□ -1.43
CCDC38-206ENST00000548771 USP39Q53GS9 565 aaKnown RBP6.13□□□□□ -1.43
CCDC38-206ENST00000548771 DDX53Q86TM3 631 aaKnown RBP6.13□□□□□ -1.43
CCDC38-206ENST00000548771 ZNF808Q8N4W9 903 aaPredicted RBP6.13□□□□□ -1.43
CCDC38-206ENST00000548771 WDR48Q8TAF3 677 aa6.13□□□□□ -1.43
CCDC38-206ENST00000548771 NKD2Q969F2 451 aaPredicted RBP6.13□□□□□ -1.43
CCDC38-206ENST00000548771 C12orf65Q9H3J6 166 aaKnown RBP6.13□□□□□ -1.43
CCDC38-206ENST00000548771 ACSS2Q9NR19 701 aa6.13□□□□□ -1.43
CCDC38-206ENST00000548771 SLC26A4O43511 780 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 SDSP20132 328 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 RGS3P49796 1198 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 KIF11P52732 1056 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 SAFB2Q14151 953 aaKnown RBP eCLIP6.12□□□□□ -1.43
CCDC38-206ENST00000548771 ZNF460Q14592 562 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 CREB3L3Q68CJ9 461 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 IGFL4Q6B9Z1 124 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 RTKN2Q8IZC4 609 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 OR14K1Q8NGZ2 314 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 IL17DQ8TAD2 202 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 RABGGTAQ92696 567 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 LPPQ93052 612 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 MAML3Q96JK9 1138 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 ORAI3Q9BRQ5 295 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 HAPLN2Q9GZV7 340 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 TMEM260Q9NX78 707 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 B4GALT6Q9UBX8 382 aa6.12□□□□□ -1.43
CCDC38-206ENST00000548771 TNPO3Q9Y5L0 923 aaKnown RBP6.12□□□□□ -1.43
CCDC38-206ENST00000548771 C2orf78A6NCI8 922 aa6.11□□□□□ -1.43
CCDC38-206ENST00000548771 ADAM15Q13444 863 aa6.11□□□□□ -1.43
CCDC38-206ENST00000548771 GRM7Q14831 915 aa6.11□□□□□ -1.43
CCDC38-206ENST00000548771 SPTY2D1Q68D10 685 aaPredicted RBP6.11□□□□□ -1.43
CCDC38-206ENST00000548771 ERCC4Q92889 916 aaPredicted RBP6.11□□□□□ -1.43
CCDC38-206ENST00000548771 FAM89AQ96GI7 184 aa6.11□□□□□ -1.43
CCDC38-206ENST00000548771 ZNF703Q9H7S9 590 aaPredicted RBP6.11□□□□□ -1.43
CCDC38-206ENST00000548771 HECAQ9UBI9 543 aaPredicted RBP6.11□□□□□ -1.43
CCDC38-206ENST00000548771 PTPDC1A2A3K4 754 aa6.1□□□□□ -1.43
CCDC38-206ENST00000548771 FAM83GA6ND36 823 aa6.1□□□□□ -1.43
CCDC38-206ENST00000548771 CBX4O00257 560 aa6.1□□□□□ -1.43
CCDC38-206ENST00000548771 PPP1R12AO14974 1030 aaPredicted RBP6.1□□□□□ -1.43
CCDC38-206ENST00000548771 CYP17A1P05093 508 aa6.1□□□□□ -1.43
CCDC38-206ENST00000548771 ACRV1P26436 265 aa6.1□□□□□ -1.43
CCDC38-206ENST00000548771 MSX2P35548 267 aaPredicted RBP6.1□□□□□ -1.43
CCDC38-206ENST00000548771 MAP3K12Q12852 859 aa6.1□□□□□ -1.43
CCDC38-206ENST00000548771 BMS1Q14692 1282 aaKnown RBP6.1□□□□□ -1.43
CCDC38-206ENST00000548771 KLHDC10Q6PID8 442 aa6.1□□□□□ -1.43
CCDC38-206ENST00000548771 ADGRE4PQ86SQ3 457 aa6.1□□□□□ -1.43
CCDC38-206ENST00000548771 SHCBP1Q8NEM2 672 aa6.1□□□□□ -1.43
CCDC38-206ENST00000548771 SH3TC2Q8TF17 1288 aa6.1□□□□□ -1.43
CCDC38-206ENST00000548771 E2F7Q96AV8 911 aa6.1□□□□□ -1.43
CCDC38-206ENST00000548771 NPIPB8E9PQR5 432 aa6.09□□□□□ -1.43
CCDC38-206ENST00000548771 PTX3P26022 381 aaPredicted RBP6.09□□□□□ -1.43
CCDC38-206ENST00000548771 SLC6A3Q01959 620 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms