RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GABBR1Q9UBS5 961 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 PADI3Q9ULW8 664 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 SAMM50Q9Y512 469 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 TRPV2Q9Y5S1 764 aa7.6□□□□□ -1.19
SCAF11-211ENST00000547950 SMIM35A0A1B0GVV1 85 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 H3BNC9 293 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 DTNBO60941 627 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 PSAPP07602 524 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 CIITAP33076 1130 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 CTNNB1P35222 781 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 BMPR1AP36894 532 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 USP11P51784 963 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 SETQ01105 290 aaPredicted RBP7.59□□□□□ -1.19
SCAF11-211ENST00000547950 PAK2Q13177 524 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 TMEM266Q2M3C6 531 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 ZNF484Q5JVG2 852 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 ZNF746Q6NUN9 644 aaPredicted RBP7.59□□□□□ -1.19
SCAF11-211ENST00000547950 KIAA0319LQ8IZA0 1049 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 BANK1Q8NDB2 785 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 CCDC148Q8NFR7 591 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 GJA10Q969M2 543 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 MRPL38Q96DV4 380 aaKnown RBP7.59□□□□□ -1.19
SCAF11-211ENST00000547950 ZNF274Q96GC6 653 aaPredicted RBP7.59□□□□□ -1.19
SCAF11-211ENST00000547950 SAMD11Q96NU1 681 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 PPP1R16BQ96T49 567 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 FTHL17Q9BXU8 183 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 SH3GLB2Q9NR46 395 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 PCDHA10Q9Y5I2 948 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 EYSQ5T1H1 3165 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 SCN5AQ14524 2016 aa7.59□□□□□ -1.19
SCAF11-211ENST00000547950 MSH4O15457 936 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 EPB41L2O43491 1005 aaKnown RBP7.58□□□□□ -1.2
SCAF11-211ENST00000547950 CHMP2AO43633 222 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 EDIL3O43854 480 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 GAS7O60861 476 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 RPS6KA5O75582 802 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 DGKIO75912 1065 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 CSPG5O95196 566 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 KCNA5P22460 613 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 KIZQ2M2Z5 673 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 PAN2Q504Q3 1202 aaKnown RBP7.58□□□□□ -1.2
SCAF11-211ENST00000547950 TCEAL5Q5H9L2 206 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 CPLX2Q6PUV4 134 aaKnown RBP7.58□□□□□ -1.2
SCAF11-211ENST00000547950 SMAP1Q8IYB5 467 aaPredicted RBP7.58□□□□□ -1.2
SCAF11-211ENST00000547950 TBCKQ8TEA7 893 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 LINC01599Q8WXQ3 324 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 AIFM3Q96NN9 605 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 TM6SF1Q9BZW5 370 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 TMX1Q9H3N1 280 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 DISC1Q9NRI5 854 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 NRBP2Q9NSY0 501 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 LRFN2Q9ULH4 789 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 PCDHA4Q9UN74 947 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 ST3GAL5Q9UNP4 418 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 NOC2LQ9Y3T9 749 aaKnown RBP7.58□□□□□ -1.2
SCAF11-211ENST00000547950 MAFBQ9Y5Q3 323 aaPredicted RBP7.58□□□□□ -1.2
SCAF11-211ENST00000547950 SQORQ9Y6N5 450 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 PRUNE2Q8WUY3 3088 aa7.58□□□□□ -1.2
SCAF11-211ENST00000547950 IGSF9BQ9UPX0 1349 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 CHD7Q9P2D1 2997 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 KIAA1217Q5T5P2 1943 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-211ENST00000547950 DENND3A2RUS2 1198 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 WDR64B1ANS9 1081 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 ZBTB42B2RXF5 422 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 GPR182O15218 404 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 GRM6O15303 877 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 DEXIO95424 95 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 C22orf31O95567 290 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 VTNP04004 478 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 RB1P06400 928 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 STAG3L1P0CL83 205 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 GATMP50440 423 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 CLCN3P51790 818 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 CRYBB1P53674 252 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-211ENST00000547950 LRCH2Q5VUJ6 765 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 EFCAB12Q6NXP0 572 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 NPAS4Q8IUM7 802 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 BLIDQ8IZY5 108 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-211ENST00000547950 TMEM40Q8WWA1 233 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 LENG9Q96B70 501 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 ZNF689Q96CS4 500 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-211ENST00000547950 ZNF668Q96K58 619 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-211ENST00000547950 RIT2Q99578 217 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 OSMRQ99650 979 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 ADAM2Q99965 735 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 C11orf84Q9BUA3 381 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-211ENST00000547950 SLKQ9H2G2 1235 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-211ENST00000547950 UBE2ZQ9H832 354 aaPredicted RBP7.57□□□□□ -1.2
SCAF11-211ENST00000547950 ERVK-5Q9HDB9 667 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 ALG13Q9NP73 1137 aaKnown RBP7.57□□□□□ -1.2
SCAF11-211ENST00000547950 PPP4R2Q9NY27 417 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 KCNJ14Q9UNX9 436 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 AKT3Q9Y243 479 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 PCDHB7Q9Y5E2 793 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 COL1A2P08123 1366 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 NID2Q14112 1375 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 TET1Q8NFU7 2136 aa7.57□□□□□ -1.2
SCAF11-211ENST00000547950 ADGRA3Q8IWK6 1321 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms