RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-204ENST00000547310 TSC22D4Q9Y3Q8 395 aa6.35□□□□□ -1.39
LGR5-204ENST00000547310 H0Y858 1186 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 ZEB2O60315 1214 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 CUTAO60888 179 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 CANXP27824 592 aaKnown RBP6.34□□□□□ -1.39
LGR5-204ENST00000547310 GLRBP48167 497 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 KPNA1P52294 538 aaPredicted RBP6.34□□□□□ -1.39
LGR5-204ENST00000547310 SMAD3P84022 425 aaKnown RBP6.34□□□□□ -1.39
LGR5-204ENST00000547310 ALDH6A1Q02252 535 aaKnown RBP6.34□□□□□ -1.39
LGR5-204ENST00000547310 KIAA2012Q0VF49 1180 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 SART3Q15020 963 aaKnown RBP6.34□□□□□ -1.39
LGR5-204ENST00000547310 KANK2Q63ZY3 851 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 TRMT10BQ6PF06 316 aaKnown RBP6.34□□□□□ -1.39
LGR5-204ENST00000547310 PASD1Q8IV76 773 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 REXO1L1PQ8IX06 675 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 KLHL36Q8N4N3 616 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 AFAP1L2Q8N4X5 818 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 HIPK4Q8NE63 616 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 CALML6Q8TD86 181 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 LEO1Q8WVC0 666 aaPredicted RBP6.34□□□□□ -1.39
LGR5-204ENST00000547310 MBD6Q96DN6 1003 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 AJUBAQ96IF1 538 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 LCORQ96JN0 433 aaPredicted RBP6.34□□□□□ -1.39
LGR5-204ENST00000547310 TACO1Q9BSH4 297 aaKnown RBP6.34□□□□□ -1.39
LGR5-204ENST00000547310 KATNBL1Q9H079 304 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 OR10A5Q9H207 317 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 THG1LQ9NWX6 298 aaKnown RBP6.34□□□□□ -1.39
LGR5-204ENST00000547310 UCKL1Q9NWZ5 548 aa6.34□□□□□ -1.39
LGR5-204ENST00000547310 PRAMEF22A3QJZ6 481 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 TGM5O43548 720 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 PLATP00750 562 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 SLC9A1P19634 815 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 PTX3P26022 381 aaPredicted RBP6.33□□□□□ -1.4
LGR5-204ENST00000547310 ADCYAP1R1P41586 468 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 GJA9P57773 515 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 IL13RA1P78552 427 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 RGL3Q3MIN7 710 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 PHF19Q5T6S3 580 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 ESRP1Q6NXG1 681 aaKnown RBP6.33□□□□□ -1.4
LGR5-204ENST00000547310 Q6ZUG5 572 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 CHST13Q8NET6 341 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 MAML3Q96JK9 1138 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 H2AFY2Q9P0M6 372 aaPredicted RBP6.33□□□□□ -1.4
LGR5-204ENST00000547310 ADAM29Q9UKF5 820 aa6.33□□□□□ -1.4
LGR5-204ENST00000547310 MROH6A6NGR9 719 aa6.32□□□□□ -1.4
LGR5-204ENST00000547310 FKBP9O95302 570 aa6.32□□□□□ -1.4
LGR5-204ENST00000547310 PRLP01236 227 aa6.32□□□□□ -1.4
LGR5-204ENST00000547310 POLD1P28340 1107 aa6.32□□□□□ -1.4
LGR5-204ENST00000547310 TOP3AQ13472 1001 aaPredicted RBP6.32□□□□□ -1.4
LGR5-204ENST00000547310 MCTP2Q6DN12 878 aa6.32□□□□□ -1.4
LGR5-204ENST00000547310 FKBP9P1Q75LS8 142 aa6.32□□□□□ -1.4
LGR5-204ENST00000547310 IFT22Q9H7X7 185 aa6.32□□□□□ -1.4
LGR5-204ENST00000547310 ZMAT4Q9H898 229 aa6.32□□□□□ -1.4
LGR5-204ENST00000547310 USP36Q9P275 1121 aaKnown RBP6.32□□□□□ -1.4
LGR5-204ENST00000547310 C11orf21Q9P2W6 132 aa6.32□□□□□ -1.4
LGR5-204ENST00000547310 UBA6A0AVT1 1052 aaPredicted RBP6.31□□□□□ -1.4
LGR5-204ENST00000547310 BRINP1O60477 761 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 EYA4O95677 639 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 CYP1A1P04798 512 aaPredicted RBP6.31□□□□□ -1.4
LGR5-204ENST00000547310 CD40P25942 277 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 APEX1P27695 318 aaKnown RBP6.31□□□□□ -1.4
LGR5-204ENST00000547310 ROM1Q03395 351 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 NFATC3Q12968 1075 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 EIF4HQ15056 248 aaKnown RBP6.31□□□□□ -1.4
LGR5-204ENST00000547310 SMN1Q16637 294 aaKnown RBP6.31□□□□□ -1.4
LGR5-204ENST00000547310 TTC38Q5R3I4 469 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 TMEM200BQ69YZ2 307 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 LRSAM1Q6UWE0 723 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 FAM124AQ86V42 546 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 C11orf74Q86VG3 221 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 PHYKPLQ8IUZ5 450 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 ZNF610Q8N9Z0 462 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 NUDT10Q8NFP7 164 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 NUDT11Q96G61 164 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 TTC1Q99614 292 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 SPC25Q9HBM1 224 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 BARX1Q9HBU1 254 aaPredicted RBP6.31□□□□□ -1.4
LGR5-204ENST00000547310 EMC7Q9NPA0 242 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 TOMM22Q9NS69 142 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 SPTLC3Q9NUV7 552 aa6.31□□□□□ -1.4
LGR5-204ENST00000547310 DNAJC6O75061 913 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 ETV4P43268 484 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 IL2P60568 153 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 TERF2Q15554 542 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 TBC1D10BQ4KMP7 808 aaPredicted RBP6.3□□□□□ -1.4
LGR5-204ENST00000547310 RNF187Q5TA31 235 aaPredicted RBP6.3□□□□□ -1.4
LGR5-204ENST00000547310 BORAQ6PGQ7 559 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 KANSL1Q7Z3B3 1105 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 STRA8Q7Z7C7 330 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 WDR48Q8TAF3 677 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 USP7Q93009 1102 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 SSBP3Q9BWW4 388 aaPredicted RBP6.3□□□□□ -1.4
LGR5-204ENST00000547310 ZDHHC5Q9C0B5 715 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 VPS11Q9H270 941 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 APOBEC2Q9Y235 224 aaKnown RBP6.3□□□□□ -1.4
LGR5-204ENST00000547310 TNFRSF18Q9Y5U5 241 aa6.3□□□□□ -1.4
LGR5-204ENST00000547310 NEMP1O14524 444 aa6.29□□□□□ -1.4
LGR5-204ENST00000547310 CPEP16870 476 aa6.29□□□□□ -1.4
LGR5-204ENST00000547310 POU3F3P20264 500 aaPredicted RBP6.29□□□□□ -1.4
LGR5-204ENST00000547310 LSP1P33241 339 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms