RNA–Protein interactions for RNA: ENST00000547055.1

RAB3IP-209, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-209ENST00000547055 TRIM39Q9HCM9 518 aa4.95□□□□□ -1.62
RAB3IP-209ENST00000547055 NPIPB8E9PQR5 432 aa4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 MSX2P35548 267 aaPredicted RBP4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 FOXL1Q12952 345 aa4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 GRM7Q14831 915 aa4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 MIIPQ5JXC2 388 aa4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 DDX53Q86TM3 631 aaKnown RBP4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 GPR135Q8IZ08 494 aa4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 LILRB2Q8N423 598 aa4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 ZNF808Q8N4W9 903 aaPredicted RBP4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 ZNF503Q96F45 646 aa4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 BOCQ9BWV1 1114 aa4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 PCED1AQ9H1Q7 454 aa4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 NELFAQ9H3P2 528 aa4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 PLA2G3Q9NZ20 509 aa4.94□□□□□ -1.62
RAB3IP-209ENST00000547055 M0R2C6 588 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 PLD2O14939 933 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 SLC26A4O43511 780 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 RAPGEF3O95398 923 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 ZBTB48P10074 688 aaPredicted RBP4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 HIBADHP31937 336 aaKnown RBP4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 ALDH6A1Q02252 535 aaKnown RBP4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 HHEXQ03014 270 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 HGFACQ04756 655 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 KLF10Q13118 480 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 ADAM15Q13444 863 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 ARHGAP44Q17R89 818 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 CC2D1AQ6P1N0 951 aaPredicted RBP4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 OTOP1Q7RTM1 612 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 RTN4RL1Q86UN2 441 aaPredicted RBP4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 C1orf210Q8IVY1 113 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 SHCBP1Q8NEM2 672 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 FOXRED1Q96CU9 486 aaPredicted RBP4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 TMEM176AQ96HP8 235 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 DNAJC2Q99543 621 aaKnown RBP4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 FOXB1Q99853 325 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 TLR9Q9NR96 1032 aa4.93□□□□□ -1.62
RAB3IP-209ENST00000547055 B4E1Z4 1266 aa4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 PLSCR1O15162 318 aa4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 ACRV1P26436 265 aa4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 IGFALSP35858 605 aa4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 KIF11P52732 1056 aa4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 PTH1RQ03431 593 aa4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 ZCCHC8Q6NZY4 707 aaKnown RBP4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 SGMS1Q86VZ5 419 aa4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 E2F7Q96AV8 911 aa4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 OSBPL2Q9H1P3 480 aa4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 SAMD15Q9P1V8 674 aa4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 CDK11AQ9UQ88 783 aaPredicted RBP4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 VWA7Q9Y334 891 aa4.92□□□□□ -1.62
RAB3IP-209ENST00000547055 PMS2P1A4D2B8 440 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 OPA1O60313 960 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 MAFO75444 373 aaPredicted RBP4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 GLRX3O76003 335 aaKnown RBP4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 FNTBP49356 437 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 MECP2P51608 486 aaKnown RBP4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 DGCR2P98153 550 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 SLC6A3Q01959 620 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 ROM1Q03395 351 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 NFE2L2Q16236 605 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 LSM12Q3MHD2 195 aaKnown RBP4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 KLHDC10Q6PID8 442 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 ADGRE4PQ86SQ3 457 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 BCL6BQ8N143 479 aaPredicted RBP4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 D2HGDHQ8N465 521 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 CHST14Q8NCH0 376 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 IL17DQ8TAD2 202 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 CLUHP3Q96NS8 147 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 PLEKHG4BQ96PX9 1271 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 AGO3Q9H9G7 860 aaKnown RBP4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 SAE1Q9UBE0 346 aaPredicted RBP4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 MAGEL2Q9UJ55 1249 aa4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 ING1Q9UK53 422 aaPredicted RBP4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 CTDP1Q9Y5B0 961 aaPredicted RBP4.91□□□□□ -1.62
RAB3IP-209ENST00000547055 DVL2O14641 736 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 H2AFYO75367 372 aaKnown RBP4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 ZNF202O95125 648 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 PRLP01236 227 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 ASLP04424 464 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 C1SP09871 688 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 STAT3P40763 770 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 RGS3P49796 1198 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 SESN2P58004 480 aaPredicted RBP4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 ATP2C1P98194 919 aaPredicted RBP4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 ABHD18Q0P651 414 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 RIN1Q13671 783 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 BMS1Q14692 1282 aaKnown RBP4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 FNDC3BQ53EP0 1204 aaKnown RBP4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 IGFL4Q6B9Z1 124 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 LPPQ93052 612 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 PCIF1Q9H4Z3 704 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 CABP5Q9NP86 173 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 ACSS2Q9NR19 701 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 DENND2AQ9ULE3 1009 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 GIT1Q9Y2X7 761 aa4.9□□□□□ -1.63
RAB3IP-209ENST00000547055 A0A1W2PRX2 142 aa4.89□□□□□ -1.63
RAB3IP-209ENST00000547055 UBA6A0AVT1 1052 aaPredicted RBP4.89□□□□□ -1.63
RAB3IP-209ENST00000547055 PTPDC1A2A3K4 754 aa4.89□□□□□ -1.63
RAB3IP-209ENST00000547055 CAPN14A8MX76 684 aa4.89□□□□□ -1.63
RAB3IP-209ENST00000547055 H7C1D1 291 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms