RNA–Protein interactions for RNA: ENST00000545930.5

DDB1-225, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,278 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-225	ENST00000545930	SV2B	Q7L1I2	683 aa		10.84	□□□□□ -0.67
DDB1-225	ENST00000545930	ARRDC4	Q8NCT1	418 aa		10.84	□□□□□ -0.67
DDB1-225	ENST00000545930	AFAP1L1	Q8TED9	768 aa		10.84	□□□□□ -0.67
DDB1-225	ENST00000545930	DYDC2	Q96IM9	177 aa		10.84	□□□□□ -0.67
DDB1-225	ENST00000545930	FAM167A	Q96KS9	214 aa		10.84	□□□□□ -0.67
DDB1-225	ENST00000545930	CCDC43	Q96MW1	224 aa	Known RBP	10.84	□□□□□ -0.67
DDB1-225	ENST00000545930	GPR20	Q99678	358 aa		10.84	□□□□□ -0.67
DDB1-225	ENST00000545930	ZNF302	Q9NR11	478 aa		10.84	□□□□□ -0.67
DDB1-225	ENST00000545930	ZNF215	Q9UL58	517 aa	Predicted RBP	10.84	□□□□□ -0.67
DDB1-225	ENST00000545930	KIAA1024	Q9UPX6	916 aa		10.84	□□□□□ -0.67
DDB1-225	ENST00000545930	PPME1	Q9Y570	386 aa		10.84	□□□□□ -0.67
DDB1-225	ENST00000545930	GSTTP1	A0A1W2PQM5	241 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	ST8SIA5	O15466	376 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	LGR5	O75473	907 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	LETM1	O95202	739 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	CCNE2	O96020	404 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	SLFN14	P0C7P3	912 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	SPATA31C1	P0DKV0	1188 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	SMCP	P49901	116 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	NKX3-2	P78367	333 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	KARS	Q15046	597 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	KLHL40	Q2TBA0	621 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	HSDL1	Q3SXM5	330 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	XKR3	Q5GH77	459 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	RNF180	Q86T96	592 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	CKAP2L	Q8IYA6	745 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	PDILT	Q8N807	584 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	PCSK9	Q8NBP7	692 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	CNNM3	Q8NE01	707 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	TRPV1	Q8NER1	839 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	ENGASE	Q8NFI3	743 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	AFG1L	Q8WV93	481 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	GLG1	Q92896	1179 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	COPS5	Q92905	334 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	LXN	Q9BS40	222 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	MMTAG2	Q9BU76	263 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	KATNAL1	Q9BW62	490 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	UPF3A	Q9H1J1	476 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	ANKEF1	Q9NU02	776 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	RGL1	Q9NZL6	768 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	GABBR1	Q9UBS5	961 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	DDX20	Q9UHI6	824 aa	Known RBP	10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	LOXHD1	Q8IVV2	1947 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	EMSY	Q7Z589	1322 aa		10.83	□□□□□ -0.68
DDB1-225	ENST00000545930	PP2D1	A8MPX8	630 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	TRAK2	O60296	914 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	HBP1	O60381	514 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	MED24	O75448	989 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	EYA4	O95677	639 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	C6orf222	P0C671	652 aa	Predicted RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	HOXD8	P13378	290 aa	Predicted RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	CCND3	P30281	292 aa	Predicted RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	CYP4A11	Q02928	519 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	TRIM32	Q13049	653 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	GRB10	Q13322	594 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	SNW1	Q13573	536 aa	Known RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	CTTN	Q14247	550 aa	Known RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	FSCN1	Q16658	493 aa	Known RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	TMEM119	Q4V9L6	283 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	UTP14C	Q5TAP6	766 aa	Known RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	KRBA2	Q6ZNG9	492 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	USP49	Q70CQ1	688 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	LARP4B	Q92615	738 aa	Known RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	CCDC47	Q96A33	483 aa	Known RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	USB1	Q9BQ65	265 aa	Known RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	JPH2	Q9BR39	696 aa	Predicted RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	PANK2	Q9BZ23	570 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	GOLPH3L	Q9H4A5	285 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	XPNPEP3	Q9NQH7	507 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	DACT1	Q9NYF0	836 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	ERAP1	Q9NZ08	941 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	KCND2	Q9NZV8	630 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	DBR1	Q9UK59	544 aa	Known RBP	10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	DOCK5	Q9H7D0	1870 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	KAT6A	Q92794	2004 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	WDR81	Q562E7	1941 aa		10.82	□□□□□ -0.68
DDB1-225	ENST00000545930	AXIN1	O15169	862 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	SORBS3	O60504	671 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	CABYR	O75952	493 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	LGALS2	P05162	132 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	MMP3	P08254	477 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	LIG1	P18858	919 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	PLCG1	P19174	1290 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	CST5	P28325	142 aa	Predicted RBP	10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	YWHAB	P31946	246 aa	Known RBP	10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	GNAS	Q5JWF2	1037 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	CCDC60	Q8IWA6	550 aa	Predicted RBP	10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	SYT2	Q8N9I0	419 aa	Predicted RBP	10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	BANK1	Q8NDB2	785 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	SH3TC2	Q8TF17	1288 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	RAD54L	Q92698	747 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	DHX58	Q96C10	678 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	PNMA5	Q96PV4	448 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	TSEN34	Q9BSV6	310 aa	Known RBP	10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	TIPIN	Q9BVW5	301 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	REPIN1	Q9BWE0	567 aa	Known RBP	10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	SEZ6L	Q9BYH1	1024 aa		10.81	□□□□□ -0.68
DDB1-225	ENST00000545930	GTPBP4	Q9BZE4	634 aa	Known RBP	10.81	□□□□□ -0.68

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