RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 SIPA1L1O43166 1804 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 H2AFZP0C0S5 128 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 COL11A2P13942 1736 aaPredicted RBP17.05■□□□□ 0.32
SCAP-215ENST00000545718 GAP43P17677 238 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 MMP14P50281 582 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 MUM1L1Q5H9M0 696 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 STYK1Q6J9G0 422 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 C1orf186Q6ZWK4 172 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 H2AFVQ71UI9 128 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 PEX26Q7Z412 305 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 DAAM2Q86T65 1068 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 GLYCTKQ8IVS8 523 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 UNC45AQ9H3U1 944 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 PCIF1Q9H4Z3 704 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 LCMT1Q9UIC8 334 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 FRMD4BQ9Y2L6 1034 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 STK24Q9Y6E0 443 aa17.05■□□□□ 0.32
SCAP-215ENST00000545718 BZW2Q9Y6E2 419 aaKnown RBP17.05■□□□□ 0.32
SCAP-215ENST00000545718 ARHGEF35A5YM69 484 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 EXOC3O60645 756 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 LRRN2O75325 713 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 PSMD10O75832 226 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 KRT14P02533 472 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 CYP3A4P08684 503 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 STAT1P42224 750 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 FKBP1AP62942 108 aaKnown RBP17.04■□□□□ 0.32
SCAP-215ENST00000545718 EMBQ6PCB8 327 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 LRRC31Q6UY01 552 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 CHURC1Q8WUH1 139 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 LXNQ9BS40 222 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 HERC5Q9UII4 1024 aaKnown RBP17.04■□□□□ 0.32
SCAP-215ENST00000545718 TMX2Q9Y320 296 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 NRXN2Q9P2S2 1712 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 RAD51CO43502 376 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 EVI5O60447 810 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 KIF4AO95239 1232 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 INPP4AQ96PE3 977 aaPredicted RBP17.04■□□□□ 0.32
SCAP-215ENST00000545718 SIX2Q9NPC8 291 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 OLFML3Q9NRN5 406 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 RNF14Q9UBS8 474 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 SLX4Q8IY92 1834 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 IPO5O00410 1097 aaKnown RBP17.04■□□□□ 0.32
SCAP-215ENST00000545718 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 PRPF4BQ13523 1007 aaKnown RBP17.04■□□□□ 0.32
SCAP-215ENST00000545718 LDHDQ86WU2 507 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 C10orf67Q8IYJ2 551 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 LARGE2Q8N3Y3 721 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 ARL8AQ96BM9 186 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 AGBL1Q96MI9 1066 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 CENPHQ9H3R5 247 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 TUFT1Q9NNX1 390 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 ZNF70Q9UC06 446 aaPredicted RBP17.04■□□□□ 0.32
SCAP-215ENST00000545718 DNAJC12Q9UKB3 198 aa17.04■□□□□ 0.32
SCAP-215ENST00000545718 MRPL11Q9Y3B7 192 aaKnown RBP17.04■□□□□ 0.32
SCAP-215ENST00000545718 PIK3CDO00329 1044 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 IVLP07476 585 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 TNNC1P63316 161 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 PAK2Q13177 524 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 DRAP1Q14919 205 aaPredicted RBP17.03■□□□□ 0.32
SCAP-215ENST00000545718 IFI16Q16666 785 aaKnown RBP17.03■□□□□ 0.32
SCAP-215ENST00000545718 CBWD6Q4V339 395 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 CBWD3Q5JTY5 395 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 CBWD5Q5RIA9 395 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 SH2D3CQ8N5H7 860 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 HOOK2Q96ED9 719 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 NACC1Q96RE7 527 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 ZNF277Q9NRM2 450 aaPredicted RBP17.03■□□□□ 0.32
SCAP-215ENST00000545718 DDX3XO00571 662 aaKnown RBP eCLIP17.03■□□□□ 0.329e-12■■■■□ 20.3
SCAP-215ENST00000545718 SLC16A3O15427 465 aaKnown RBP17.03■□□□□ 0.32
SCAP-215ENST00000545718 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
SCAP-215ENST00000545718 BMT2Q1RMZ1 405 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 CFAP58Q5T655 872 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 DPY19L2P1Q6NXN4 242 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 USP38Q8NB14 1042 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 CASKIN2Q8WXE0 1202 aa17.03■□□□□ 0.32
SCAP-215ENST00000545718 ATRNL1Q5VV63 1379 aa17.02■□□□□ 0.32
SCAP-215ENST00000545718 ZMYM2Q9UBW7 1377 aa17.02■□□□□ 0.32
SCAP-215ENST00000545718 TISP43B9A030 160 aa17.02■□□□□ 0.32
SCAP-215ENST00000545718 PLSCR1O15162 318 aa17.02■□□□□ 0.32
SCAP-215ENST00000545718 OPA1O60313 960 aa17.02■□□□□ 0.32
SCAP-215ENST00000545718 FMO5P49326 533 aa17.02■□□□□ 0.32
SCAP-215ENST00000545718 NAA35Q5VZE5 725 aa17.02■□□□□ 0.32
SCAP-215ENST00000545718 ADAT2Q7Z6V5 191 aaKnown RBP17.02■□□□□ 0.32
SCAP-215ENST00000545718 ZIM3Q96PE6 472 aa17.02■□□□□ 0.32
SCAP-215ENST00000545718 TEKT3Q9BXF9 490 aa17.02■□□□□ 0.32
SCAP-215ENST00000545718 DDX47Q9H0S4 455 aaKnown RBP17.02■□□□□ 0.32
SCAP-215ENST00000545718 EHMT1Q9H9B1 1298 aa17.02■□□□□ 0.32
SCAP-215ENST00000545718 K7ENM7 598 aa17.02■□□□□ 0.31
SCAP-215ENST00000545718 USP8P40818 1118 aa17.02■□□□□ 0.31
SCAP-215ENST00000545718 ATP1A2P50993 1020 aa17.02■□□□□ 0.31
SCAP-215ENST00000545718 GLE1Q53GS7 698 aaKnown RBP17.02■□□□□ 0.31
SCAP-215ENST00000545718 ZNF720Q7Z2F6 126 aa17.02■□□□□ 0.31
SCAP-215ENST00000545718 DDX42Q86XP3 938 aaKnown RBP eCLIP17.02■□□□□ 0.31
SCAP-215ENST00000545718 OSGEPQ9NPF4 335 aa17.02■□□□□ 0.31
SCAP-215ENST00000545718 AGPAT3Q9NRZ7 376 aa17.02■□□□□ 0.31
SCAP-215ENST00000545718 CCPG1Q9ULG6 757 aa17.02■□□□□ 0.31
SCAP-215ENST00000545718 TRIM66O15016 1216 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 HIP1RO75146 1068 aa17.01■□□□□ 0.31
SCAP-215ENST00000545718 GALCP54803 685 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms