RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 GRM6O15303 877 aa23.83■■□□□ 1.41
SCARB1-210ENST00000545493 BMPR1AP36894 532 aa23.83■■□□□ 1.41
SCARB1-210ENST00000545493 SARSP49591 514 aaKnown RBP23.83■■□□□ 1.41
SCARB1-210ENST00000545493 CRYBB1P53674 252 aaPredicted RBP23.83■■□□□ 1.41
SCARB1-210ENST00000545493 PAN2Q504Q3 1202 aaKnown RBP23.83■■□□□ 1.41
SCARB1-210ENST00000545493 TCEAL5Q5H9L2 206 aa23.83■■□□□ 1.41
SCARB1-210ENST00000545493 KRT25Q7Z3Z0 450 aa23.83■■□□□ 1.41
SCARB1-210ENST00000545493 BANK1Q8NDB2 785 aa23.83■■□□□ 1.41
SCARB1-210ENST00000545493 C11orf84Q9BUA3 381 aaPredicted RBP23.83■■□□□ 1.41
SCARB1-210ENST00000545493 ST3GAL5Q9UNP4 418 aa23.83■■□□□ 1.41
SCARB1-210ENST00000545493 RB1P06400 928 aa23.82■■□□□ 1.4
SCARB1-210ENST00000545493 MIER3Q7Z3K6 550 aa23.82■■□□□ 1.4
SCARB1-210ENST00000545493 RDM1Q8NG50 284 aa23.82■■□□□ 1.4
SCARB1-210ENST00000545493 NSUN3Q9H649 340 aaKnown RBP23.82■■□□□ 1.4
SCARB1-210ENST00000545493 DDX25Q9UHL0 483 aaKnown RBP23.82■■□□□ 1.4
SCARB1-210ENST00000545493 MAGEB2O15479 319 aa23.81■■□□□ 1.4
SCARB1-210ENST00000545493 STAG3L1P0CL83 205 aa23.81■■□□□ 1.4
SCARB1-210ENST00000545493 IBSPP21815 317 aaPredicted RBP23.81■■□□□ 1.4
SCARB1-210ENST00000545493 LETM2Q2VYF4 491 aa23.81■■□□□ 1.4
SCARB1-210ENST00000545493 OXER1Q8TDS5 423 aa23.81■■□□□ 1.4
SCARB1-210ENST00000545493 RGS18Q9NS28 235 aa23.81■■□□□ 1.4
SCARB1-210ENST00000545493 AKT3Q9Y243 479 aa23.81■■□□□ 1.4
SCARB1-210ENST00000545493 PLXNA4Q9HCM2 1894 aa23.81■■□□□ 1.4
SCARB1-210ENST00000545493 TMEM150BA6NC51 233 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 STBD1O95210 358 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 MMP1P03956 469 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 KCNA5P22460 613 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 COL19A1Q14993 1142 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 TARBP2Q15633 366 aaKnown RBP23.8■■□□□ 1.4
SCARB1-210ENST00000545493 EFCAB12Q6NXP0 572 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 GTF3C6Q969F1 213 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 CEP89Q96ST8 783 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 MAP7D2Q96T17 732 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 ADAM2Q99965 735 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 LMAN2LQ9H0V9 348 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 ADAMTS10Q9H324 1103 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 KCNMB3Q9NPA1 279 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 SEPT9Q9UHD8 586 aaPredicted RBP23.8■■□□□ 1.4
SCARB1-210ENST00000545493 VAV3Q9UKW4 847 aa23.8■■□□□ 1.4
SCARB1-210ENST00000545493 CCDC194A0A1B0GVG4 234 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 DENND3A2RUS2 1198 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 C9IYK1 514 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 GPR182O15218 404 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 FDPSP14324 419 aaKnown RBP23.79■■□□□ 1.4
SCARB1-210ENST00000545493 GPC3P51654 580 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 DRP2Q13474 957 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 DSC3Q14574 896 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 ANKRD1Q15327 319 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 ME3Q16798 604 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 LEXMQ3ZCV2 418 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 EARS2Q5JPH6 523 aaKnown RBP23.79■■□□□ 1.4
SCARB1-210ENST00000545493 NECAB1Q8N987 351 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 ZNF668Q96K58 619 aaPredicted RBP23.79■■□□□ 1.4
SCARB1-210ENST00000545493 PLVAPQ9BX97 442 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 C1orf112Q9NSG2 853 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 NRBP2Q9NSY0 501 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 ORC3Q9UBD5 711 aaPredicted RBP23.79■■□□□ 1.4
SCARB1-210ENST00000545493 LRFN2Q9ULH4 789 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 MYO7AQ13402 2215 aa23.79■■□□□ 1.4
SCARB1-210ENST00000545493 CSPG5O95196 566 aa23.78■■□□□ 1.4
SCARB1-210ENST00000545493 NLRP11P59045 1033 aaKnown RBP23.78■■□□□ 1.4
SCARB1-210ENST00000545493 CAMK1Q14012 370 aa23.78■■□□□ 1.4
SCARB1-210ENST00000545493 ODR4Q5SWX8 454 aa23.78■■□□□ 1.4
SCARB1-210ENST00000545493 PIK3AP1Q6ZUJ8 805 aa23.78■■□□□ 1.4
SCARB1-210ENST00000545493 NEK8Q86SG6 692 aa23.78■■□□□ 1.4
SCARB1-210ENST00000545493 NEK9Q8TD19 979 aa23.78■■□□□ 1.4
SCARB1-210ENST00000545493 C5orf42Q9H799 3197 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 FAM205CA6NFA0 338 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 EML1O00423 815 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 XBP1P17861 261 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 TMOD1P28289 359 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 TBC1D8BQ0IIM8 1120 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 ST3GAL1Q11201 340 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 MTERF2Q49AM1 385 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 FAM43BQ6ZT52 329 aaPredicted RBP23.77■■□□□ 1.4
SCARB1-210ENST00000545493 SLC24A5Q71RS6 500 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.77■■□□□ 1.4
SCARB1-210ENST00000545493 P2RX5Q93086 422 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 PABPC5Q96DU9 382 aaKnown RBP23.77■■□□□ 1.4
SCARB1-210ENST00000545493 SH2D3AQ9BRG2 576 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 NIFKQ9BYG3 293 aaKnown RBP23.77■■□□□ 1.4
SCARB1-210ENST00000545493 ALG13Q9NP73 1137 aaKnown RBP23.77■■□□□ 1.4
SCARB1-210ENST00000545493 HCSTQ9UBK5 93 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 ARID2Q68CP9 1835 aa23.77■■□□□ 1.4
SCARB1-210ENST00000545493 SEC24BO95487 1268 aa23.76■■□□□ 1.39
SCARB1-210ENST00000545493 ITGB1P05556 798 aa23.76■■□□□ 1.39
SCARB1-210ENST00000545493 DNAJB1P25685 340 aa23.76■■□□□ 1.39
SCARB1-210ENST00000545493 PPP2R5CQ13362 524 aa23.76■■□□□ 1.39
SCARB1-210ENST00000545493 XKR3Q5GH77 459 aa23.76■■□□□ 1.39
SCARB1-210ENST00000545493 FAM102BQ5T8I3 360 aa23.76■■□□□ 1.39
SCARB1-210ENST00000545493 PPP4R3AQ6IN85 833 aa23.76■■□□□ 1.39
SCARB1-210ENST00000545493 POTEDQ86YR6 584 aa23.76■■□□□ 1.39
SCARB1-210ENST00000545493 NSUN7Q8NE18 718 aaKnown RBP23.76■■□□□ 1.39
SCARB1-210ENST00000545493 TNFRSF25Q93038 417 aa23.76■■□□□ 1.39
SCARB1-210ENST00000545493 PLAGL2Q9UPG8 496 aa23.76■■□□□ 1.39
SCARB1-210ENST00000545493 PCDHB7Q9Y5E2 793 aa23.76■■□□□ 1.39
SCARB1-210ENST00000545493 IGKV6-21A0A0C4DH24 114 aa23.75■■□□□ 1.39
SCARB1-210ENST00000545493 H3BQ06 376 aaPredicted RBP23.75■■□□□ 1.39
SCARB1-210ENST00000545493 IL9P15248 144 aa23.75■■□□□ 1.39
SCARB1-210ENST00000545493 GCFC2P16383 781 aaKnown RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms