RNA–Protein interactions for RNA: ENST00000545038.5

DDX47-212, Transcript of DEAD-box helicase 47, humanhuman

TSL 1 (best)

Gene DDX47, Length 2,357 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-212ENST00000545038 TMOD3Q9NYL9 352 aa8.61□□□□□ -1.03
DDX47-212ENST00000545038 PCDHA3Q9Y5H8 950 aa8.61□□□□□ -1.03
DDX47-212ENST00000545038 PALM3A6NDB9 673 aaPredicted RBP8.6□□□□□ -1.03
DDX47-212ENST00000545038 SPDYE5A6NIY4 337 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 GH1P01241 217 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 RAB27AP51159 221 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 COPS2P61201 443 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 MECOMQ03112 1051 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 AUHQ13825 339 aaKnown RBP8.6□□□□□ -1.03
DDX47-212ENST00000545038 MPP2Q14168 576 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 NONOQ15233 471 aaKnown RBP eCLIP8.6□□□□□ -1.03
DDX47-212ENST00000545038 ANO7Q6IWH7 933 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 HOOK3Q86VS8 718 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 SLC44A5Q8NCS7 719 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 SCFD1Q8WVM8 642 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 ALG3Q92685 438 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 BIN2Q9UBW5 565 aaPredicted RBP8.6□□□□□ -1.03
DDX47-212ENST00000545038 STK17AQ9UEE5 414 aa8.6□□□□□ -1.03
DDX47-212ENST00000545038 SMCO2A6NFE2 343 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 TCP11X1B4DZS4 312 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 ANKRD63C9JTQ0 380 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 RGS16O15492 202 aaPredicted RBP8.59□□□□□ -1.03
DDX47-212ENST00000545038 STARD3NLO95772 234 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 ATP2A2P16615 1042 aaKnown RBP8.59□□□□□ -1.03
DDX47-212ENST00000545038 GNAZP19086 355 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 ATP4AP20648 1035 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 PRDX5P30044 214 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 RPL21P46778 160 aaKnown RBP8.59□□□□□ -1.03
DDX47-212ENST00000545038 CASP5P51878 434 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 DR1Q01658 176 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 TMEM119Q4V9L6 283 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 SPDYCQ5MJ68 293 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 DENND2CQ68D51 928 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 VSTM1Q6UX27 236 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 OTUD6AQ7L8S5 288 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 JAMLQ86YT9 394 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 LNX1Q8TBB1 728 aaPredicted RBP8.59□□□□□ -1.03
DDX47-212ENST00000545038 MGARPQ8TDB4 240 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 C18orf8Q96DM3 657 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 NAF1Q96HR8 494 aaKnown RBP8.59□□□□□ -1.03
DDX47-212ENST00000545038 UIMC1Q96RL1 719 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 SIX2Q9NPC8 291 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 HOMER3Q9NSC5 361 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 ETAA1Q9NY74 926 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 USP15Q9Y4E8 981 aaPredicted RBP8.59□□□□□ -1.03
DDX47-212ENST00000545038 SRCAPQ6ZRS2 3230 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 LIN7AO14910 233 aaPredicted RBP8.59□□□□□ -1.03
DDX47-212ENST00000545038 TP73O15350 636 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 SNUPNO95149 360 aaKnown RBP8.59□□□□□ -1.03
DDX47-212ENST00000545038 ADAMTS2O95450 1211 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 PON1P27169 355 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 PTGIRP43119 386 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 NAPAP54920 295 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 FAM26FQ5R3K3 315 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 AP1ARQ63HQ0 302 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 GALNT17Q6IS24 598 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 TTC27Q6P3X3 843 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 FOXR2Q6PJQ5 311 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 FAM43BQ6ZT52 329 aaPredicted RBP8.59□□□□□ -1.03
DDX47-212ENST00000545038 BARGINQ6ZT62 677 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 DGKHQ86XP1 1220 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 FAM84BQ96KN1 310 aaPredicted RBP8.59□□□□□ -1.03
DDX47-212ENST00000545038 TSG101Q99816 390 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 OSBPL1AQ9BXW6 950 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 ZFATQ9P243 1243 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 PRKAG3Q9UGI9 489 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 TTC7AQ9ULT0 858 aaPredicted RBP8.59□□□□□ -1.03
DDX47-212ENST00000545038 PHLPP1O60346 1717 aa8.59□□□□□ -1.03
DDX47-212ENST00000545038 CCDC169A6NNP5 214 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 GJB6O95452 261 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 AGTP01019 485 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 FESP07332 822 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 PECAM1P16284 738 aaPredicted RBP8.58□□□□□ -1.04
DDX47-212ENST00000545038 HOXD13P35453 343 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 PRKCIP41743 596 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 CTCFP49711 727 aaPredicted RBP8.58□□□□□ -1.04
DDX47-212ENST00000545038 FXR2P51116 673 aaKnown RBP eCLIP8.58□□□□□ -1.04
DDX47-212ENST00000545038 PDE6CP51160 858 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 ZNF131P52739 623 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 GALCP54803 685 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 PPATQ06203 517 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 PRPF4BQ13523 1007 aaKnown RBP8.58□□□□□ -1.04
DDX47-212ENST00000545038 SLMAPQ14BN4 828 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 ZNF568Q3ZCX4 644 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 KIAA1755Q5JYT7 1200 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 TRIM68Q6AZZ1 485 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 C3orf67Q6ZVT6 689 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 KRT25Q7Z3Z0 450 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 COL23A1Q86Y22 540 aaPredicted RBP8.58□□□□□ -1.04
DDX47-212ENST00000545038 PALB2Q86YC2 1186 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 ZC3H3Q8IXZ2 948 aaKnown RBP8.58□□□□□ -1.04
DDX47-212ENST00000545038 SH3RF3Q8TEJ3 882 aaPredicted RBP8.58□□□□□ -1.04
DDX47-212ENST00000545038 SNX29Q8TEQ0 813 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 TMEM47Q9BQJ4 181 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 SYT15Q9BQS2 421 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 RAB17Q9H0T7 212 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 BCAS3Q9H6U6 928 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 CTNNAL1Q9UBT7 734 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 JAG2Q9Y219 1238 aa8.58□□□□□ -1.04
DDX47-212ENST00000545038 DAAM1Q9Y4D1 1078 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms