RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 FAM178BQ8IXR5 827 aa33.64■■■□□ 2.98
CCM2-219ENST00000544363 NOC3LQ8WTT2 800 aaKnown RBP33.64■■■□□ 2.98
CCM2-219ENST00000544363 IFNKQ9P0W0 207 aa33.64■■■□□ 2.98
CCM2-219ENST00000544363 ZSWIM8A7E2V4 1837 aa33.63■■■□□ 2.97
CCM2-219ENST00000544363 TRPA1O75762 1119 aa33.63■■■□□ 2.97
CCM2-219ENST00000544363 GCNT3O95395 438 aa33.63■■■□□ 2.97
CCM2-219ENST00000544363 SLC26A2P50443 739 aa33.63■■■□□ 2.97
CCM2-219ENST00000544363 FAM102BQ5T8I3 360 aa33.63■■■□□ 2.97
CCM2-219ENST00000544363 TRIM50Q86XT4 487 aa33.63■■■□□ 2.97
CCM2-219ENST00000544363 CSGALNACT2Q8N6G5 542 aa33.63■■■□□ 2.97
CCM2-219ENST00000544363 MCPH1Q8NEM0 835 aa33.63■■■□□ 2.97
CCM2-219ENST00000544363 AFG1LQ8WV93 481 aa33.63■■■□□ 2.97
CCM2-219ENST00000544363 TSG101Q99816 390 aa33.63■■■□□ 2.97
CCM2-219ENST00000544363 SRRTQ9BXP5 876 aaKnown RBP33.63■■■□□ 2.97
CCM2-219ENST00000544363 THAP9Q9H5L6 903 aa33.63■■■□□ 2.97
CCM2-219ENST00000544363 PLS3P13797 630 aa33.62■■■□□ 2.97
CCM2-219ENST00000544363 NMT1P30419 496 aaKnown RBP33.62■■■□□ 2.97
CCM2-219ENST00000544363 HTRA3P83110 453 aa33.62■■■□□ 2.97
CCM2-219ENST00000544363 KIF22Q14807 665 aa33.62■■■□□ 2.97
CCM2-219ENST00000544363 BMT2Q1RMZ1 405 aa33.62■■■□□ 2.97
CCM2-219ENST00000544363 ZNF720Q7Z2F6 126 aa33.62■■■□□ 2.97
CCM2-219ENST00000544363 ZNF507Q8TCN5 953 aa33.62■■■□□ 2.97
CCM2-219ENST00000544363 BBXQ8WY36 941 aaPredicted RBP33.62■■■□□ 2.97
CCM2-219ENST00000544363 ATP6V0A4Q9HBG4 840 aa33.62■■■□□ 2.97
CCM2-219ENST00000544363 GPRC5CQ9NQ84 441 aa33.62■■■□□ 2.97
CCM2-219ENST00000544363 GABRQQ9UN88 632 aa33.62■■■□□ 2.97
CCM2-219ENST00000544363 EIF3DO15371 548 aaKnown RBP eCLIP33.61■■■□□ 2.97
CCM2-219ENST00000544363 MAPTP10636 758 aaKnown RBP33.61■■■□□ 2.97
CCM2-219ENST00000544363 TARBP2Q15633 366 aaKnown RBP33.61■■■□□ 2.97
CCM2-219ENST00000544363 ARHGAP30Q7Z6I6 1101 aaPredicted RBP33.61■■■□□ 2.97
CCM2-219ENST00000544363 NELFCDQ8IXH7 590 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 OR6J1Q8NGC5 347 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 XPO4Q9C0E2 1151 aaKnown RBP33.61■■■□□ 2.97
CCM2-219ENST00000544363 KCTD10Q9H3F6 313 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 ADCY6O43306 1168 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 PRPF6O94906 941 aaKnown RBP33.61■■■□□ 2.97
CCM2-219ENST00000544363 CDC25BP30305 580 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 UBASH3AP57075 661 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 ZCWPW2Q504Y3 356 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 STXBP4Q6ZWJ1 553 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 ATP8B4Q8TF62 1192 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 KIFAP3Q92845 792 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 CEP89Q96ST8 783 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 XPNPEP1Q9NQW7 623 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 PPME1Q9Y570 386 aa33.61■■■□□ 2.97
CCM2-219ENST00000544363 CBFA2T2O43439 604 aa33.6■■■□□ 2.97
CCM2-219ENST00000544363 FLT3LGP49771 235 aa33.6■■■□□ 2.97
CCM2-219ENST00000544363 SPAG1Q07617 926 aa33.6■■■□□ 2.97
CCM2-219ENST00000544363 PLCB4Q15147 1175 aa33.6■■■□□ 2.97
CCM2-219ENST00000544363 KNOP1Q1ED39 458 aaKnown RBP33.6■■■□□ 2.97
CCM2-219ENST00000544363 DHX33Q9H6R0 707 aaKnown RBP33.6■■■□□ 2.97
CCM2-219ENST00000544363 PPFIA4O75335 1185 aa33.59■■■□□ 2.97
CCM2-219ENST00000544363 MARK3P27448 753 aa33.59■■■□□ 2.97
CCM2-219ENST00000544363 HOXD13P35453 343 aa33.59■■■□□ 2.97
CCM2-219ENST00000544363 POLGP54098 1239 aaPredicted RBP33.59■■■□□ 2.97
CCM2-219ENST00000544363 IRF2BP1Q8IU81 584 aa33.59■■■□□ 2.97
CCM2-219ENST00000544363 GNEQ9Y223 722 aaKnown RBP33.59■■■□□ 2.97
CCM2-219ENST00000544363 UBE4BO95155 1302 aa33.58■■■□□ 2.97
CCM2-219ENST00000544363 LGALS2P05162 132 aa33.58■■■□□ 2.97
CCM2-219ENST00000544363 RFC5P40937 340 aa33.58■■■□□ 2.97
CCM2-219ENST00000544363 EMC2Q15006 297 aa33.58■■■□□ 2.97
CCM2-219ENST00000544363 C17orf75Q9HAS0 396 aa33.58■■■□□ 2.97
CCM2-219ENST00000544363 PCDHB13Q9Y5F0 798 aa33.58■■■□□ 2.97
CCM2-219ENST00000544363 TCP11X2Q5H9J9 407 aa33.57■■■□□ 2.97
CCM2-219ENST00000544363 NAP1L5Q96NT1 182 aaPredicted RBP33.57■■■□□ 2.97
CCM2-219ENST00000544363 STRA6Q9BX79 667 aa33.57■■■□□ 2.97
CCM2-219ENST00000544363 ERAP1Q9NZ08 941 aa33.57■■■□□ 2.97
CCM2-219ENST00000544363 KCNJ18B7U540 433 aa33.57■■■□□ 2.96
CCM2-219ENST00000544363 HOXD8P13378 290 aaPredicted RBP33.57■■■□□ 2.96
CCM2-219ENST00000544363 CAP1Q01518 475 aa33.57■■■□□ 2.96
CCM2-219ENST00000544363 PRKCZQ05513 592 aa33.57■■■□□ 2.96
CCM2-219ENST00000544363 KCNJ12Q14500 433 aa33.57■■■□□ 2.96
CCM2-219ENST00000544363 ZC2HC1CQ53FD0 456 aaPredicted RBP33.57■■■□□ 2.96
CCM2-219ENST00000544363 PPP4R3CPQ6ZMV5 832 aa33.57■■■□□ 2.96
CCM2-219ENST00000544363 APTXQ7Z2E3 356 aaKnown RBP33.57■■■□□ 2.96
CCM2-219ENST00000544363 CTAGE1Q96RT6 745 aa33.57■■■□□ 2.96
CCM2-219ENST00000544363 LIMA1Q9UHB6 759 aaKnown RBP33.57■■■□□ 2.96
CCM2-219ENST00000544363 NRBP1Q9UHY1 535 aa33.57■■■□□ 2.96
CCM2-219ENST00000544363 PPP1R37O75864 691 aa33.56■■■□□ 2.96
CCM2-219ENST00000544363 FGFR1OPO95684 399 aaKnown RBP33.56■■■□□ 2.96
CCM2-219ENST00000544363 MMP3P08254 477 aa33.56■■■□□ 2.96
CCM2-219ENST00000544363 PEX3P56589 373 aa33.56■■■□□ 2.96
CCM2-219ENST00000544363 RTP1P59025 263 aa33.56■■■□□ 2.96
CCM2-219ENST00000544363 ALCAMQ13740 583 aa33.56■■■□□ 2.96
CCM2-219ENST00000544363 SLC17A8Q8NDX2 589 aa33.56■■■□□ 2.96
CCM2-219ENST00000544363 ANKRD20A12PQ8NF67 263 aa33.56■■■□□ 2.96
CCM2-219ENST00000544363 SLC7A3Q8WY07 619 aa33.56■■■□□ 2.96
CCM2-219ENST00000544363 FAM184BQ9ULE4 1060 aa33.56■■■□□ 2.96
CCM2-219ENST00000544363 K7ENM7 598 aa33.55■■■□□ 2.96
CCM2-219ENST00000544363 EEF1GP26641 437 aaKnown RBP33.55■■■□□ 2.96
CCM2-219ENST00000544363 SOX10P56693 466 aa33.55■■■□□ 2.96
CCM2-219ENST00000544363 MFSD14CQ5VZR4 134 aa33.55■■■□□ 2.96
CCM2-219ENST00000544363 FAM114A1Q8IWE2 563 aa33.55■■■□□ 2.96
CCM2-219ENST00000544363 ST6GALNAC4Q9H4F1 302 aa33.55■■■□□ 2.96
CCM2-219ENST00000544363 TRAF3IP3Q9Y228 551 aa33.55■■■□□ 2.96
CCM2-219ENST00000544363 LRRC10BA6NIK2 292 aa33.54■■■□□ 2.96
CCM2-219ENST00000544363 PDXKO00764 312 aa33.54■■■□□ 2.96
CCM2-219ENST00000544363 DYNC1LI2O43237 492 aaPredicted RBP33.54■■■□□ 2.96
CCM2-219ENST00000544363 HBP1O60381 514 aa33.54■■■□□ 2.96
CCM2-219ENST00000544363 NCKAP1LP55160 1127 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms