RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 GCNT4Q9P109 453 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 NENFQ9UMX5 172 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 PLAAQ9Y263 795 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 A0A0A6YYK5 440 aaPredicted RBP18.09■□□□□ 0.49
KDM2B-216ENST00000543025 GOLGA6L10A6NI86 522 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 YDJCA8MPS7 323 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 FAM86B1E9PN63 330 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 GCNT3O95395 438 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 FAM86B2P0C5J1 330 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 ECHS1P30084 290 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 SREBF1P36956 1147 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 B4GALNT4Q76KP1 1039 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 MAATS1Q7Z4T9 603 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 SIX2Q9NPC8 291 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 NOC2LQ9Y3T9 749 aaKnown RBP18.09■□□□□ 0.49
KDM2B-216ENST00000543025 SAMM50Q9Y512 469 aa18.09■□□□□ 0.49
KDM2B-216ENST00000543025 ADAMTSL1Q8N6G6 1762 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 GTPBP10A4D1E9 387 aaKnown RBP18.08■□□□□ 0.49
KDM2B-216ENST00000543025 TMCO5BA8MYB1 307 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 CCDC188H7C350 402 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 TBCAO75347 108 aaKnown RBP18.08■□□□□ 0.49
KDM2B-216ENST00000543025 FOSP01100 380 aaPredicted RBP18.08■□□□□ 0.49
KDM2B-216ENST00000543025 LSP1P33241 339 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 PRELPP51888 382 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 LRIG3Q6UXM1 1119 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 PEX26Q7Z412 305 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 SYCE1Q8N0S2 351 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 METTL13Q8N6R0 699 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 BHMT2Q9H2M3 363 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 INTUQ9ULD6 942 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 SBF1O95248 1867 aa18.08■□□□□ 0.49
KDM2B-216ENST00000543025 ATXN2Q99700 1313 aaKnown RBP18.08■□□□□ 0.48
KDM2B-216ENST00000543025 RSPH10B2B2RC85 870 aa18.08■□□□□ 0.48
KDM2B-216ENST00000543025 SART1O43290 800 aaKnown RBP18.08■□□□□ 0.48
KDM2B-216ENST00000543025 ERLIN2O94905 339 aa18.08■□□□□ 0.48
KDM2B-216ENST00000543025 H2AFZP0C0S5 128 aa18.08■□□□□ 0.48
KDM2B-216ENST00000543025 RSPH10BP0C881 870 aa18.08■□□□□ 0.48
KDM2B-216ENST00000543025 ZBTB48P10074 688 aaPredicted RBP18.08■□□□□ 0.48
KDM2B-216ENST00000543025 CASP4P49662 377 aa18.08■□□□□ 0.48
KDM2B-216ENST00000543025 CERKLQ49MI3 558 aaPredicted RBP18.08■□□□□ 0.48
KDM2B-216ENST00000543025 CEP85LQ5SZL2 805 aa18.08■□□□□ 0.48
KDM2B-216ENST00000543025 H2AFVQ71UI9 128 aa18.08■□□□□ 0.48
KDM2B-216ENST00000543025 SLFN11Q7Z7L1 901 aa18.08■□□□□ 0.48
KDM2B-216ENST00000543025 SPATS2Q86XZ4 545 aaKnown RBP18.08■□□□□ 0.48
KDM2B-216ENST00000543025 DNAAF5Q86Y56 855 aa18.08■□□□□ 0.48
KDM2B-216ENST00000543025 LRRC45Q96CN5 670 aa18.08■□□□□ 0.48
KDM2B-216ENST00000543025 EPN3Q9H201 632 aa18.08■□□□□ 0.48
KDM2B-216ENST00000543025 GUCY1A3Q02108 690 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 CYP4A11Q02928 519 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 ZFPM1Q8IX07 1006 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 AP1M1Q9BXS5 423 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 OLFML3Q9NRN5 406 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 SUCLA2Q9P2R7 463 aaPredicted RBP18.07■□□□□ 0.48
KDM2B-216ENST00000543025 AJAP1Q9UKB5 411 aaPredicted RBP18.07■□□□□ 0.48
KDM2B-216ENST00000543025 RABGAP1Q9Y3P9 1069 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 DICER1Q9UPY3 1922 aaKnown RBP18.07■□□□□ 0.48
KDM2B-216ENST00000543025 PPP1R37O75864 691 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 FERP16591 822 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 NPEPPSP55786 919 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 ITGB3BPQ13352 177 aaPredicted RBP18.07■□□□□ 0.48
KDM2B-216ENST00000543025 FBXO11Q86XK2 927 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 RASGEF1CQ8N431 466 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 TMBIM4Q9HC24 238 aa18.07■□□□□ 0.48
KDM2B-216ENST00000543025 BHMG1C9JSJ3 638 aaPredicted RBP18.06■□□□□ 0.48
KDM2B-216ENST00000543025 KRIT1O00522 736 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 CLIC2O15247 247 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 MSH4O15457 936 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 EYA4O95677 639 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 CIITAP33076 1130 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 HSD17B3P37058 310 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 PTPROQ16827 1216 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 USH1GQ495M9 461 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 NIM1KQ8IY84 436 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 KCTD17Q8N5Z5 321 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 POLR3CQ9BUI4 534 aaPredicted RBP18.06■□□□□ 0.48
KDM2B-216ENST00000543025 RUSC1Q9BVN2 902 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 VAV3Q9UKW4 847 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 STXBP5LQ9Y2K9 1186 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 PCDHB13Q9Y5F0 798 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 FAM196BA6NMK8 535 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 DDX3XO00571 662 aaKnown RBP eCLIP18.06■□□□□ 0.482e-11■■■■■ 36.7
KDM2B-216ENST00000543025 MDH1P40925 334 aaKnown RBP18.06■□□□□ 0.48
KDM2B-216ENST00000543025 LIG3P49916 1009 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 ICA1Q05084 483 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 SHROOM1Q2M3G4 852 aaPredicted RBP18.06■□□□□ 0.48
KDM2B-216ENST00000543025 DAAM2Q86T65 1068 aa18.06■□□□□ 0.48
KDM2B-216ENST00000543025 DDX47Q9H0S4 455 aaKnown RBP18.06■□□□□ 0.48
KDM2B-216ENST00000543025 GCOM1H8Y6P7 765 aaPredicted RBP18.05■□□□□ 0.48
KDM2B-216ENST00000543025 MYZAPP0CAP1 466 aa18.05■□□□□ 0.48
KDM2B-216ENST00000543025 GAP43P17677 238 aa18.05■□□□□ 0.48
KDM2B-216ENST00000543025 INPP5BP32019 993 aa18.05■□□□□ 0.48
KDM2B-216ENST00000543025 STAT1P42224 750 aa18.05■□□□□ 0.48
KDM2B-216ENST00000543025 CRKP46108 304 aa18.05■□□□□ 0.48
KDM2B-216ENST00000543025 KCNA1Q09470 495 aa18.05■□□□□ 0.48
KDM2B-216ENST00000543025 STRIP1Q5VSL9 837 aa18.05■□□□□ 0.48
KDM2B-216ENST00000543025 ARFGAP2Q8N6H7 521 aa18.05■□□□□ 0.48
KDM2B-216ENST00000543025 EIF2AK1Q9BQI3 630 aaKnown RBP18.05■□□□□ 0.48
KDM2B-216ENST00000543025 SLITRK6Q9H5Y7 841 aa18.05■□□□□ 0.48
KDM2B-216ENST00000543025 PI4KBQ9UBF8 816 aa18.05■□□□□ 0.48
KDM2B-216ENST00000543025 F5H6K3 240 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms