RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 GAS2O43903 313 aaKnown RBP6.53□□□□□ -1.36
ABCF1-207ENST00000542772 C22orf31O95567 290 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 RPLP2P05387 115 aaKnown RBP6.53□□□□□ -1.36
ABCF1-207ENST00000542772 STAT6P42226 847 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 SARSP49591 514 aaKnown RBP6.53□□□□□ -1.36
ABCF1-207ENST00000542772 RTP1P59025 263 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 CDC42EP1Q00587 391 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 RBL2Q08999 1139 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 MAPK7Q13164 816 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 MCM6Q14566 821 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 NFKBIBQ15653 356 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 GRIK4Q16099 956 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 SKOR2Q2VWA4 1001 aaPredicted RBP6.53□□□□□ -1.36
ABCF1-207ENST00000542772 MTERF2Q49AM1 385 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 NT5DC1Q5TFE4 455 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 IER5Q5VY09 327 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 GDF6Q6KF10 455 aaPredicted RBP6.53□□□□□ -1.36
ABCF1-207ENST00000542772 EFCAB12Q6NXP0 572 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 PADI6Q6TGC4 694 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 NECAB2Q7Z6G3 386 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 SERINC5Q86VE9 423 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 CKAP2LQ8IYA6 745 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 KIAA0319LQ8IZA0 1049 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 C7orf31Q8N865 590 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 CNNM3Q8NE01 707 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 DHX58Q96C10 678 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 ABHD8Q96I13 439 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 PAWRQ96IZ0 340 aaKnown RBP6.53□□□□□ -1.36
ABCF1-207ENST00000542772 TRIM9Q9C026 710 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 SENP6Q9GZR1 1112 aaPredicted RBP6.53□□□□□ -1.36
ABCF1-207ENST00000542772 XPNPEP1Q9NQW7 623 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 DACT1Q9NYF0 836 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 KCNG1Q9UIX4 513 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 ODF2LQ9ULJ1 636 aa6.53□□□□□ -1.36
ABCF1-207ENST00000542772 ARHGEF35A5YM69 484 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 GTPBP6O43824 516 aaPredicted RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 KLRC4O43908 158 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 MBD3O95983 291 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 MAPTP10636 758 aaKnown RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 MARK3P27448 753 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 ZNF131P52739 623 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 ZNF200P98182 395 aaPredicted RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 EHHADHQ08426 723 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 TBC1D8BQ0IIM8 1120 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 FAAP100Q0VG06 881 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 DPYDQ12882 1025 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 PPFIA1Q13136 1202 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 PTK7Q13308 1070 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 ZRSR1Q15695 479 aaKnown RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 TRIM71Q2Q1W2 868 aaKnown RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 KLHL40Q2TBA0 621 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 FAM26DQ5JW98 314 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 PLA2G4FQ68DD2 849 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 TAF2Q6P1X5 1199 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 RBM43Q6ZSC3 357 aaKnown RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 FAM43BQ6ZT52 329 aaPredicted RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 TRMT1LQ7Z2T5 733 aaKnown RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 IFNLR1Q8IU57 520 aaPredicted RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 FAM126BQ8IXS8 530 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 CEP57L1Q8IYX8 460 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 DAW1Q8N136 415 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 RETREG2Q8NC44 543 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 MCPH1Q8NEM0 835 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 DIS3LQ8TF46 1054 aaKnown RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 LMBR1Q8WVP7 490 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 TRAPPC12Q8WVT3 735 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 TCP11Q8WWU5 503 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 SLC7A3Q8WY07 619 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 DDX12PQ92771 950 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 VTI1AQ96AJ9 217 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 FIZ1Q96SL8 496 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 SH2D3AQ9BRG2 576 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 RUSC1Q9BVN2 902 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 C11orf49Q9H6J7 331 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 BMP2KQ9NSY1 1161 aaPredicted RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 SEPT9Q9UHD8 586 aaPredicted RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 TUBE1Q9UJT0 475 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 TRPC6Q9Y210 931 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 ARID2Q68CP9 1835 aa6.52□□□□□ -1.37
ABCF1-207ENST00000542772 KIAA0100Q14667 2235 aaKnown RBP6.52□□□□□ -1.37
ABCF1-207ENST00000542772 MROH7Q68CQ1 1323 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 B4GALT4O60513 344 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 CAND2O75155 1236 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 GPR32O75388 356 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 MYCNP04198 464 aaPredicted RBP6.51□□□□□ -1.37
ABCF1-207ENST00000542772 SCP2P22307 547 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 TMOD1P28289 359 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 RGS19P49795 217 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 DNM2P50570 870 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 POLGP54098 1239 aaPredicted RBP6.51□□□□□ -1.37
ABCF1-207ENST00000542772 PSMD2Q13200 908 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 DRP2Q13474 957 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 CUL4BQ13620 913 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 MXD4Q14582 209 aaPredicted RBP6.51□□□□□ -1.37
ABCF1-207ENST00000542772 KCNB1Q14721 858 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 EMC2Q15006 297 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 POSTNQ15063 836 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 PTGISQ16647 500 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 UNC13DQ70J99 1090 aa6.51□□□□□ -1.37
ABCF1-207ENST00000542772 GPBP1Q86WP2 473 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms