RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 TRAPPC12Q8WVT3 735 aa25.68■■□□□ 1.7
HOMER3-205ENST00000542541 PAGE5Q96GU1 130 aa25.68■■□□□ 1.7
HOMER3-205ENST00000542541 PAWRQ96IZ0 340 aaKnown RBP25.68■■□□□ 1.7
HOMER3-205ENST00000542541 TIPINQ9BVW5 301 aa25.68■■□□□ 1.7
HOMER3-205ENST00000542541 ATP6V0A4Q9HBG4 840 aa25.68■■□□□ 1.7
HOMER3-205ENST00000542541 TUBE1Q9UJT0 475 aa25.68■■□□□ 1.7
HOMER3-205ENST00000542541 KRT18P05783 430 aaKnown RBP25.67■■□□□ 1.7
HOMER3-205ENST00000542541 EN2P19622 333 aaPredicted RBP25.67■■□□□ 1.7
HOMER3-205ENST00000542541 SKOR2Q2VWA4 1001 aaPredicted RBP25.67■■□□□ 1.7
HOMER3-205ENST00000542541 MARCH8Q5T0T0 291 aa25.67■■□□□ 1.7
HOMER3-205ENST00000542541 C1orf186Q6ZWK4 172 aa25.67■■□□□ 1.7
HOMER3-205ENST00000542541 DIS3LQ8TF46 1054 aaKnown RBP25.67■■□□□ 1.7
HOMER3-205ENST00000542541 MBLAC1A4D2B0 266 aaPredicted RBP25.66■■□□□ 1.7
HOMER3-205ENST00000542541 C22orf31O95567 290 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 TMOD1P28289 359 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 AFMP43652 599 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 DNM2P50570 870 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 ADAM17P78536 824 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 EMC2Q15006 297 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 PPP1R13LQ8WUF5 828 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 MTRQ99707 1265 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 RUSC1Q9BVN2 902 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 GUCY2CP25092 1073 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 CDK7P50613 346 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 C1orf53Q5VUE5 145 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 SLC39A5Q6ZMH5 540 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 SH3RF1Q7Z6J0 888 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 METTL13Q8N6R0 699 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 TCP11Q8WWU5 503 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 STAMQ92783 540 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 SUGCTQ9HAC7 445 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 PDLIM7Q9NR12 457 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 PCDHA2Q9Y5H9 948 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 MROH7Q68CQ1 1323 aa25.66■■□□□ 1.7
HOMER3-205ENST00000542541 IGKV6-21A0A0C4DH24 114 aa25.65■■□□□ 1.7
HOMER3-205ENST00000542541 ARSHQ5FYA8 562 aa25.65■■□□□ 1.7
HOMER3-205ENST00000542541 GDF6Q6KF10 455 aaPredicted RBP25.65■■□□□ 1.7
HOMER3-205ENST00000542541 EFCAB12Q6NXP0 572 aa25.65■■□□□ 1.7
HOMER3-205ENST00000542541 DDX12PQ92771 950 aa25.65■■□□□ 1.7
HOMER3-205ENST00000542541 C7orf25Q9BPX7 421 aa25.65■■□□□ 1.7
HOMER3-205ENST00000542541 NOD1Q9Y239 953 aa25.65■■□□□ 1.7
HOMER3-205ENST00000542541 MYMKA6NI61 221 aa25.64■■□□□ 1.7
HOMER3-205ENST00000542541 PTGISQ16647 500 aa25.64■■□□□ 1.7
HOMER3-205ENST00000542541 TAF2Q6P1X5 1199 aa25.64■■□□□ 1.7
HOMER3-205ENST00000542541 TRIM9Q9C026 710 aa25.64■■□□□ 1.7
HOMER3-205ENST00000542541 ODF2LQ9ULJ1 636 aa25.64■■□□□ 1.7
HOMER3-205ENST00000542541 LOXHD1Q8IVV2 1947 aa25.64■■□□□ 1.69
HOMER3-205ENST00000542541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.63■■□□□ 1.69
HOMER3-205ENST00000542541 TREHO43280 583 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 GTPBP6O43824 516 aaPredicted RBP25.63■■□□□ 1.69
HOMER3-205ENST00000542541 RPLP2P05387 115 aaKnown RBP25.63■■□□□ 1.69
HOMER3-205ENST00000542541 CYP2C9P11712 490 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 ATN1P54259 1190 aaPredicted RBP25.63■■□□□ 1.69
HOMER3-205ENST00000542541 POSTNQ15063 836 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 IER5Q5VY09 327 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 CNNM4Q6P4Q7 775 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 DRC1Q96MC2 740 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 XPNPEP1Q9NQW7 623 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 SMIM35A0A1B0GVV1 85 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 ZNF200P98182 395 aaPredicted RBP25.63■■□□□ 1.69
HOMER3-205ENST00000542541 HIC1Q14526 733 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 KLHL40Q2TBA0 621 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 FAM102BQ5T8I3 360 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 DYMQ7RTS9 669 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 KIFAP3Q92845 792 aa25.63■■□□□ 1.69
HOMER3-205ENST00000542541 CCDC85CA6NKD9 419 aa25.62■■□□□ 1.69
HOMER3-205ENST00000542541 TLR3O15455 904 aaKnown RBP25.62■■□□□ 1.69
HOMER3-205ENST00000542541 MDM2Q00987 491 aaPredicted RBP25.62■■□□□ 1.69
HOMER3-205ENST00000542541 RAD51AP2Q09MP3 1159 aa25.62■■□□□ 1.69
HOMER3-205ENST00000542541 GIT2Q14161 759 aa25.62■■□□□ 1.69
HOMER3-205ENST00000542541 SNX17Q15036 470 aa25.62■■□□□ 1.69
HOMER3-205ENST00000542541 MAEAQ7L5Y9 396 aa25.62■■□□□ 1.69
HOMER3-205ENST00000542541 GRAMD1CQ8IYS0 662 aa25.62■■□□□ 1.69
HOMER3-205ENST00000542541 LRRC71Q8N4P6 559 aa25.62■■□□□ 1.69
HOMER3-205ENST00000542541 MAP7D2Q96T17 732 aa25.62■■□□□ 1.69
HOMER3-205ENST00000542541 REEP2Q9BRK0 252 aa25.62■■□□□ 1.69
HOMER3-205ENST00000542541 NUP62CLQ9H1M0 184 aa25.62■■□□□ 1.69
HOMER3-205ENST00000542541 CLSTN2Q9H4D0 955 aa25.62■■□□□ 1.69
HOMER3-205ENST00000542541 TBCAO75347 108 aaKnown RBP25.61■■□□□ 1.69
HOMER3-205ENST00000542541 ANKRD33Q7Z3H0 272 aa25.61■■□□□ 1.69
HOMER3-205ENST00000542541 UBE2Q1Q7Z7E8 422 aa25.61■■□□□ 1.69
HOMER3-205ENST00000542541 SERINC5Q86VE9 423 aa25.61■■□□□ 1.69
HOMER3-205ENST00000542541 PSPC1Q8WXF1 523 aaKnown RBP25.61■■□□□ 1.69
HOMER3-205ENST00000542541 SYAP1Q96A49 352 aaPredicted RBP25.61■■□□□ 1.69
HOMER3-205ENST00000542541 TMEM143Q96AN5 459 aa25.61■■□□□ 1.69
HOMER3-205ENST00000542541 TOX2Q96NM4 488 aa25.61■■□□□ 1.69
HOMER3-205ENST00000542541 BLZF1Q9H2G9 400 aa25.61■■□□□ 1.69
HOMER3-205ENST00000542541 TRMT13Q9NUP7 481 aaKnown RBP25.61■■□□□ 1.69
HOMER3-205ENST00000542541 KCNG1Q9UIX4 513 aa25.61■■□□□ 1.69
HOMER3-205ENST00000542541 KAT6AQ92794 2004 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 NPHP3-ACAD11A0A0J9YXS1 232 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 DCDC2CA8MYV0 355 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 HIP1RO75146 1068 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 ASIC1P78348 528 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 CDC42EP1Q00587 391 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 PTK7Q13308 1070 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 CUL4BQ13620 913 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 MXD4Q14582 209 aaPredicted RBP25.6■■□□□ 1.69
HOMER3-205ENST00000542541 RSPH3Q86UC2 560 aa25.6■■□□□ 1.69
HOMER3-205ENST00000542541 ZNF710Q8N1W2 664 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms