RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 C16orf92Q96LL3 132 aa4.46□□□□□ -1.7
USP28-210ENST00000542033 TUBGCP5Q96RT8 1024 aa4.46□□□□□ -1.7
USP28-210ENST00000542033 FOXB1Q99853 325 aa4.46□□□□□ -1.7
USP28-210ENST00000542033 AMNQ9BXJ7 453 aa4.46□□□□□ -1.7
USP28-210ENST00000542033 OR10A5Q9H207 317 aa4.46□□□□□ -1.7
USP28-210ENST00000542033 EMC7Q9NPA0 242 aa4.46□□□□□ -1.7
USP28-210ENST00000542033 MCM8Q9UJA3 840 aa4.46□□□□□ -1.7
USP28-210ENST00000542033 FBXO10Q9UK96 956 aa4.46□□□□□ -1.7
USP28-210ENST00000542033 CNOT11Q9UKZ1 510 aaKnown RBP4.46□□□□□ -1.7
USP28-210ENST00000542033 ULK1O75385 1050 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 KLHL18O94889 574 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 APOL3O95236 402 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 CELA3BP08861 270 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 COL6A1P12109 1028 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 APEX1P27695 318 aaKnown RBP4.45□□□□□ -1.7
USP28-210ENST00000542033 IL13RA1P78552 427 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 SMAD3P84022 425 aaKnown RBP4.45□□□□□ -1.7
USP28-210ENST00000542033 MAP3K12Q12852 859 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 LRRC32Q14392 662 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 GPR158Q5T848 1215 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 SLFN12LQ6IEE8 588 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 ESRP1Q6NXG1 681 aaKnown RBP4.45□□□□□ -1.7
USP28-210ENST00000542033 LRSAM1Q6UWE0 723 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 Q6ZUG5 572 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 HDGFL2Q7Z4V5 671 aaPredicted RBP4.45□□□□□ -1.7
USP28-210ENST00000542033 RALYLQ86SE5 291 aaKnown RBP4.45□□□□□ -1.7
USP28-210ENST00000542033 FERMT3Q86UX7 667 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 PHYKPLQ8IUZ5 450 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 ZCRB1Q8TBF4 217 aaKnown RBP4.45□□□□□ -1.7
USP28-210ENST00000542033 RTF1Q92541 710 aaKnown RBP4.45□□□□□ -1.7
USP28-210ENST00000542033 RPGRQ92834 1020 aaKnown RBP4.45□□□□□ -1.7
USP28-210ENST00000542033 SLC5A5Q92911 643 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 MAML3Q96JK9 1138 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 BDH2Q9BUT1 245 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 ADAM29Q9UKF5 820 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 INVSQ9Y283 1065 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 ZDHHC9Q9Y397 364 aa4.45□□□□□ -1.7
USP28-210ENST00000542033 ADAMTS20P59510 1910 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.44□□□□□ -1.7
USP28-210ENST00000542033 B8ZZF3 427 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 MAFGO15525 162 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 TGM5O43548 720 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 PRICKLE3O43900 615 aaPredicted RBP4.44□□□□□ -1.7
USP28-210ENST00000542033 PLATP00750 562 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 PRLP01236 227 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 IBSPP21815 317 aaPredicted RBP4.44□□□□□ -1.7
USP28-210ENST00000542033 POLD1P28340 1107 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 ADCY8P40145 1251 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 ID4P47928 161 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 PHC1P78364 1004 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 CD83Q01151 205 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 PLP2Q04941 152 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 TERF2Q15554 542 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 IQSEC1Q6DN90 963 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 ARHGEF18Q6ZSZ5 1173 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 ESPNLQ6ZVH7 1005 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 KBTBD2Q8IY47 623 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 ZNF610Q8N9Z0 462 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 NUDT10Q8NFP7 164 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 WDR66Q8TBY9 1149 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 NUDT11Q96G61 164 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 AJUBAQ96IF1 538 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 ZMAT4Q9H898 229 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 USP36Q9P275 1121 aaKnown RBP4.44□□□□□ -1.7
USP28-210ENST00000542033 KCNG1Q9UIX4 513 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 MSRAQ9UJ68 235 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 NOC2LQ9Y3T9 749 aaKnown RBP4.44□□□□□ -1.7
USP28-210ENST00000542033 DUSP10Q9Y6W6 482 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 ZNF536O15090 1300 aa4.44□□□□□ -1.7
USP28-210ENST00000542033 ST20-MTHFSA0A0A6YYL1 179 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 K7ESM1 405 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 LAMTOR5O43504 91 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 KDM1AO60341 852 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 RGS3P49796 1198 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 SESN3P58005 492 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 TMPRSS15P98073 1019 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 ADCY2Q08462 1091 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 MOGSQ13724 837 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 USP10Q14694 798 aaKnown RBP4.43□□□□□ -1.7
USP28-210ENST00000542033 STAT4Q14765 748 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 STILQ15468 1287 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 BROXQ5VW32 411 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 GRAMD4Q6IC98 578 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 FRMD7Q6ZUT3 714 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 FERMT2Q96AC1 680 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 MBD6Q96DN6 1003 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 CARD11Q9BXL7 1154 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 BRINP2Q9C0B6 783 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 POFUT1Q9H488 388 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 ATP8A1Q9Y2Q0 1164 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 COL4A3BPQ9Y5P4 624 aa4.43□□□□□ -1.7
USP28-210ENST00000542033 A0A0G2JNJ9 132 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 PRRG2O14669 202 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 GPR39O43194 453 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 B4GALT3O60512 393 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 PRPF6O94906 941 aaKnown RBP4.42□□□□□ -1.7
USP28-210ENST00000542033 EYA4O95677 639 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 HMGCRP04035 888 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 ETV4P43268 484 aa4.42□□□□□ -1.7
USP28-210ENST00000542033 KCNQ1P51787 676 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms