RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PURAQ00577 322 aaKnown RBP30.81■■■□□ 2.52
CCM2-218ENST00000541586 EHHADHQ08426 723 aa30.81■■■□□ 2.52
CCM2-218ENST00000541586 STK4Q13043 487 aa30.81■■■□□ 2.52
CCM2-218ENST00000541586 SARM1Q6SZW1 724 aa30.81■■■□□ 2.52
CCM2-218ENST00000541586 ADSSL1Q8N142 457 aa30.81■■■□□ 2.52
CCM2-218ENST00000541586 CTNND2Q9UQB3 1225 aa30.81■■■□□ 2.52
CCM2-218ENST00000541586 MARK3P27448 753 aa30.81■■■□□ 2.52
CCM2-218ENST00000541586 HPS3Q969F9 1004 aa30.81■■■□□ 2.52
CCM2-218ENST00000541586 C16orf70Q9BSU1 422 aa30.81■■■□□ 2.52
CCM2-218ENST00000541586 KPNA6O60684 536 aa30.8■■■□□ 2.52
CCM2-218ENST00000541586 KRT18P05783 430 aaKnown RBP30.8■■■□□ 2.52
CCM2-218ENST00000541586 HOXD8P13378 290 aaPredicted RBP30.8■■■□□ 2.52
CCM2-218ENST00000541586 STX17P56962 302 aa30.8■■■□□ 2.52
CCM2-218ENST00000541586 RAD51AP2Q09MP3 1159 aa30.8■■■□□ 2.52
CCM2-218ENST00000541586 FAM160B1Q5W0V3 765 aa30.8■■■□□ 2.52
CCM2-218ENST00000541586 PPP1R13LQ8WUF5 828 aa30.8■■■□□ 2.52
CCM2-218ENST00000541586 TSEN34Q9BSV6 310 aaKnown RBP30.8■■■□□ 2.52
CCM2-218ENST00000541586 SMARCAD1Q9H4L7 1026 aa30.8■■■□□ 2.52
CCM2-218ENST00000541586 PANK4Q9NVE7 773 aa30.8■■■□□ 2.52
CCM2-218ENST00000541586 FANCLQ9NW38 375 aa30.8■■■□□ 2.52
CCM2-218ENST00000541586 NFE2L3Q9Y4A8 694 aa30.8■■■□□ 2.52
CCM2-218ENST00000541586 FRMPD3Q5JV73 1810 aa30.8■■■□□ 2.52
CCM2-218ENST00000541586 DNAH12Q6ZR08 3092 aa30.79■■■□□ 2.52
CCM2-218ENST00000541586 MOXD2PA6NHM9 499 aa30.79■■■□□ 2.52
CCM2-218ENST00000541586 H3BRB1 525 aa30.79■■■□□ 2.52
CCM2-218ENST00000541586 CACNB1Q02641 598 aaPredicted RBP30.79■■■□□ 2.52
CCM2-218ENST00000541586 COASYQ13057 564 aa30.79■■■□□ 2.52
CCM2-218ENST00000541586 KIAA0895Q8NCT3 520 aa30.79■■■□□ 2.52
CCM2-218ENST00000541586 RUSC1Q9BVN2 902 aa30.79■■■□□ 2.52
CCM2-218ENST00000541586 TRIM5Q9C035 493 aa30.79■■■□□ 2.52
CCM2-218ENST00000541586 TUT1Q9H6E5 874 aaKnown RBP30.79■■■□□ 2.52
CCM2-218ENST00000541586 RWDD2AQ9UIY3 292 aa30.79■■■□□ 2.52
CCM2-218ENST00000541586 IGKV6D-21A0A0A0MT36 114 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 LYPLA2O95372 231 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 PAK1Q13153 545 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 GIT2Q14161 759 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 UGCGQ16739 394 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 CCDC65Q8IXS2 484 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 NELFBQ8WX92 580 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 MTG1Q9BT17 334 aaPredicted RBP30.78■■■□□ 2.52
CCM2-218ENST00000541586 SLC39A2Q9NP94 309 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 LGR5O75473 907 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 STIM1Q13586 685 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 RINT1Q6NUQ1 792 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 DIS3LQ8TF46 1054 aaKnown RBP30.78■■■□□ 2.52
CCM2-218ENST00000541586 KAT2BQ92831 832 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 GLT1D1Q96MS3 346 aa30.78■■■□□ 2.52
CCM2-218ENST00000541586 SENP6Q9GZR1 1112 aaPredicted RBP30.78■■■□□ 2.52
CCM2-218ENST00000541586 ZNF215Q9UL58 517 aaPredicted RBP30.78■■■□□ 2.52
CCM2-218ENST00000541586 FRMD3A2A2Y4 597 aa30.77■■■□□ 2.52
CCM2-218ENST00000541586 SOX10P56693 466 aa30.77■■■□□ 2.52
CCM2-218ENST00000541586 PSMC5P62195 406 aa30.77■■■□□ 2.52
CCM2-218ENST00000541586 PSMD2Q13200 908 aa30.77■■■□□ 2.52
CCM2-218ENST00000541586 COBLL1Q53SF7 1204 aa30.77■■■□□ 2.52
CCM2-218ENST00000541586 SPATA1Q5VX52 437 aa30.77■■■□□ 2.52
CCM2-218ENST00000541586 REEP2Q9BRK0 252 aa30.77■■■□□ 2.52
CCM2-218ENST00000541586 ERAP1Q9NZ08 941 aa30.77■■■□□ 2.52
CCM2-218ENST00000541586 MKI67P46013 3256 aaKnown RBP30.76■■■□□ 2.52
CCM2-218ENST00000541586 MNX1P50219 401 aaPredicted RBP30.76■■■□□ 2.52
CCM2-218ENST00000541586 ZNF75DP51815 510 aa30.76■■■□□ 2.52
CCM2-218ENST00000541586 KIAA0753Q2KHM9 967 aa30.76■■■□□ 2.52
CCM2-218ENST00000541586 PLPPR4Q7Z2D5 763 aa30.76■■■□□ 2.52
CCM2-218ENST00000541586 C4orf19Q8IY42 314 aa30.76■■■□□ 2.52
CCM2-218ENST00000541586 RNPEPQ9H4A4 650 aa30.76■■■□□ 2.52
CCM2-218ENST00000541586 MAFBQ9Y5Q3 323 aaPredicted RBP30.76■■■□□ 2.52
CCM2-218ENST00000541586 EMSYQ7Z589 1322 aa30.76■■■□□ 2.51
CCM2-218ENST00000541586 A0A1W2PQ45 241 aaPredicted RBP30.76■■■□□ 2.51
CCM2-218ENST00000541586 A0A1W2PQY0 241 aa30.76■■■□□ 2.51
CCM2-218ENST00000541586 ATP1A3P13637 1013 aa30.76■■■□□ 2.51
CCM2-218ENST00000541586 C1orf186Q6ZWK4 172 aa30.76■■■□□ 2.51
CCM2-218ENST00000541586 ATP6V0A1Q93050 837 aa30.76■■■□□ 2.51
CCM2-218ENST00000541586 PAWRQ96IZ0 340 aaKnown RBP30.76■■■□□ 2.51
CCM2-218ENST00000541586 PHF24Q9UPV7 400 aa30.76■■■□□ 2.51
CCM2-218ENST00000541586 PSMA7O14818 248 aa30.75■■■□□ 2.51
CCM2-218ENST00000541586 F2P00734 622 aa30.75■■■□□ 2.51
CCM2-218ENST00000541586 PSEN2P49810 448 aa30.75■■■□□ 2.51
CCM2-218ENST00000541586 MFSD10Q14728 455 aa30.75■■■□□ 2.51
CCM2-218ENST00000541586 ANKLE1Q8NAG6 615 aa30.75■■■□□ 2.51
CCM2-218ENST00000541586 AFAP1L1Q8TED9 768 aa30.75■■■□□ 2.51
CCM2-218ENST00000541586 STARD7Q9NQZ5 370 aa30.75■■■□□ 2.51
CCM2-218ENST00000541586 DBR1Q9UK59 544 aaKnown RBP30.75■■■□□ 2.51
CCM2-218ENST00000541586 LOXHD1Q8IVV2 1947 aa30.74■■■□□ 2.51
CCM2-218ENST00000541586 ATP4AP20648 1035 aa30.74■■■□□ 2.51
CCM2-218ENST00000541586 PPP1R2P41236 205 aa30.74■■■□□ 2.51
CCM2-218ENST00000541586 HERC4Q5GLZ8 1057 aaPredicted RBP30.74■■■□□ 2.51
CCM2-218ENST00000541586 DHTKD1Q96HY7 919 aaPredicted RBP30.74■■■□□ 2.51
CCM2-218ENST00000541586 KATNAL1Q9BW62 490 aa30.74■■■□□ 2.51
CCM2-218ENST00000541586 SAMSN1Q9NSI8 373 aaKnown RBP30.74■■■□□ 2.51
CCM2-218ENST00000541586 ARHGEF35A5YM69 484 aa30.73■■■□□ 2.51
CCM2-218ENST00000541586 ZNF862O60290 1169 aa30.73■■■□□ 2.51
CCM2-218ENST00000541586 CABYRO75952 493 aa30.73■■■□□ 2.51
CCM2-218ENST00000541586 ZNF18P17022 549 aa30.73■■■□□ 2.51
CCM2-218ENST00000541586 YWHABP31946 246 aaKnown RBP30.73■■■□□ 2.51
CCM2-218ENST00000541586 FAM26FQ5R3K3 315 aa30.73■■■□□ 2.51
CCM2-218ENST00000541586 KCND2Q9NZV8 630 aa30.73■■■□□ 2.51
CCM2-218ENST00000541586 TRPC6Q9Y210 931 aa30.73■■■□□ 2.51
CCM2-218ENST00000541586 PCDHA2Q9Y5H9 948 aa30.73■■■□□ 2.51
CCM2-218ENST00000541586 NBPF20Q3BBV1 942 aa30.73■■■□□ 2.51
CCM2-218ENST00000541586 ZHX3Q9H4I2 956 aa30.73■■■□□ 2.51
CCM2-218ENST00000541586 IGSF9BQ9UPX0 1349 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms