RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 THAP9Q9H5L6 903 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 OGFRQ9NZT2 677 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 SEL1LQ9UBV2 794 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 SEPT9Q9UHD8 586 aaPredicted RBP9.58□□□□□ -0.88
THBS3-210ENST00000541576 IGKV6D-21A0A0A0MT36 114 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 A0A1B0GTH6 734 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 LRRC10BA6NIK2 292 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 NOP56O00567 594 aaKnown RBP9.58□□□□□ -0.88
THBS3-210ENST00000541576 TEX33O43247 280 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 STBD1O95210 358 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 TCF7P36402 384 aaPredicted RBP9.58□□□□□ -0.88
THBS3-210ENST00000541576 TNNT3P45378 269 aaPredicted RBP9.58□□□□□ -0.88
THBS3-210ENST00000541576 KRT31Q15323 416 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 ELF2Q15723 593 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 MORN1Q5T089 497 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 MAEAQ7L5Y9 396 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 NELFCDQ8IXH7 590 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 TIPINQ9BVW5 301 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 MYH11P35749 1972 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 ZNF236Q9UL36 1845 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 KCNJ18B7U540 433 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 CA12O43570 354 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 GCNT3O95395 438 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 SNAI1O95863 264 aaPredicted RBP9.58□□□□□ -0.88
THBS3-210ENST00000541576 MAP2K5Q13163 448 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 MAPK7Q13164 816 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 NOGQ13253 232 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 KCNJ12Q14500 433 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 TCP11X2Q5H9J9 407 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 ODR4Q5SWX8 454 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 FAM160B1Q5W0V3 765 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 TAPT1Q6NXT6 567 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 FOXR2Q6PJQ5 311 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 EPM2AIP1Q7L775 607 aaPredicted RBP9.58□□□□□ -0.88
THBS3-210ENST00000541576 CREBRFQ8IUR6 639 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 FAM178BQ8IXR5 827 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 DAW1Q8N136 415 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 NPLOC4Q8TAT6 608 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 CACTINQ8WUQ7 758 aaKnown RBP9.58□□□□□ -0.88
THBS3-210ENST00000541576 SPATA33Q96N06 139 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 GPR20Q99678 358 aa9.58□□□□□ -0.88
THBS3-210ENST00000541576 MAGEC2Q9UBF1 373 aaPredicted RBP9.58□□□□□ -0.88
THBS3-210ENST00000541576 LIMA1Q9UHB6 759 aaKnown RBP9.58□□□□□ -0.88
THBS3-210ENST00000541576 NKRFO15226 690 aaKnown RBP eCLIP9.57□□□□□ -0.88
THBS3-210ENST00000541576 ALDH1A1P00352 501 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 OATP04181 439 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 MYBP10242 640 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 EEF1GP26641 437 aaKnown RBP9.57□□□□□ -0.88
THBS3-210ENST00000541576 HOXD13P35453 343 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 STAT5BP51692 787 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 HSDL1Q3SXM5 330 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 VSTM4Q8IW00 320 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 MSL3Q8N5Y2 521 aaKnown RBP9.57□□□□□ -0.88
THBS3-210ENST00000541576 COPS5Q92905 334 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 DRC1Q96MC2 740 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 KATNBL1Q9H079 304 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 AZI2Q9H6S1 392 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 CYP26B1Q9NR63 512 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 LARSQ9P2J5 1176 aaKnown RBP9.57□□□□□ -0.88
THBS3-210ENST00000541576 ZNF215Q9UL58 517 aaPredicted RBP9.57□□□□□ -0.88
THBS3-210ENST00000541576 RBM47A0AV96 593 aaKnown RBP9.57□□□□□ -0.88
THBS3-210ENST00000541576 PRPF6O94906 941 aaKnown RBP9.57□□□□□ -0.88
THBS3-210ENST00000541576 FILIP1LQ4L180 1135 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 ZCWPW2Q504Y3 356 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 TMEM63BQ5T3F8 832 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 FAM114A1Q8IWE2 563 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 AFAP1L1Q8TED9 768 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 PCYT2Q99447 389 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 TAB2Q9NYJ8 693 aa9.57□□□□□ -0.88
THBS3-210ENST00000541576 USP27XA6NNY8 438 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 TNPO2O14787 897 aaKnown RBP9.56□□□□□ -0.88
THBS3-210ENST00000541576 DGAT1O75907 488 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 FGFR1OPO95684 399 aaKnown RBP9.56□□□□□ -0.88
THBS3-210ENST00000541576 ATP4AP20648 1035 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 NMT1P30419 496 aaKnown RBP9.56□□□□□ -0.88
THBS3-210ENST00000541576 BMT2Q1RMZ1 405 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 DEFB115Q30KQ5 88 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 FAM102BQ5T8I3 360 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 STXBP4Q6ZWJ1 553 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 ZNF507Q8TCN5 953 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 FIZ1Q96SL8 496 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 VPS16Q9H269 839 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 KCTD10Q9H3F6 313 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 ABHD16BQ9H3Z7 469 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 EIF3DO15371 548 aaKnown RBP eCLIP9.56□□□□□ -0.88
THBS3-210ENST00000541576 HOXC6P09630 235 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 PLS3P13797 630 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 ADCYAP1R1P41586 468 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 COPB1P53618 953 aaKnown RBP9.56□□□□□ -0.88
THBS3-210ENST00000541576 LAMC2Q13753 1193 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 KNOP1Q1ED39 458 aaKnown RBP9.56□□□□□ -0.88
THBS3-210ENST00000541576 SKIDA1Q1XH10 827 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 MTERF2Q49AM1 385 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 ZNF720Q7Z2F6 126 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 GLG1Q92896 1179 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 CAPNS2Q96L46 248 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 GPRC5CQ9NQ84 441 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 CREBZFQ9NS37 354 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 NRBP2Q9NSY0 501 aa9.56□□□□□ -0.88
THBS3-210ENST00000541576 RASSF10A6NK89 507 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms