RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 CMTR1Q8N1G2 835 aaKnown RBP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 AGBL1Q96MI9 1066 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 FAM161BQ96MY7 647 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 NDEL1Q9GZM8 345 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 PCDHA5Q9Y5H7 936 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 TARSL2A2RTX5 802 aaKnown RBP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 TMED10P49755 219 aaKnown RBP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 BEND6Q5SZJ8 279 aaPredicted RBP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 TSSK1BQ9BXA7 367 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 UBAP1LF5GYI3 381 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 FTCDO95954 541 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 KCTD2Q14681 263 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 CENPPQ6IPU0 288 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 TLK2Q86UE8 772 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 APPL2Q8NEU8 664 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 SEC24DO94855 1032 aaPredicted RBP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 NDUFA8P51970 172 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 KCNV2Q8TDN2 545 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 OSBPL1AQ9BXW6 950 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 ECT2Q9H8V3 914 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 NHEJ1Q9H9Q4 299 aaPredicted RBP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 EIF4A2Q14240 407 aaKnown RBP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 TBC1D9BQ66K14 1250 aa16.38■□□□□ 0.21
HMGA2-210ENST00000541363 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.38■□□□□ 0.21
HMGA2-210ENST00000541363 ABCC12Q96J65 1359 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 VPS11Q9H270 941 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 NSMCE4AQ9NXX6 385 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 FLT4P35916 1363 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 ZBTB33Q86T24 672 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.37■□□□□ 0.21
HMGA2-210ENST00000541363 AURKCQ9UQB9 309 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 PLAAQ9Y263 795 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 YTHDC2Q9H6S0 1430 aaKnown RBP16.37■□□□□ 0.21
HMGA2-210ENST00000541363 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 AP1M1Q9BXS5 423 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 EIF2S1P05198 315 aaKnown RBP16.37■□□□□ 0.21
HMGA2-210ENST00000541363 ABCE1P61221 599 aaKnown RBP16.37■□□□□ 0.21
HMGA2-210ENST00000541363 THEMIS2Q5TEJ8 643 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 OLFML3Q9NRN5 406 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 RALBP11234 206 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 MFSD14BQ5SR56 506 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 ERICH1Q86X53 443 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 GPKOWQ92917 476 aaPredicted RBP eCLIP16.37■□□□□ 0.21
HMGA2-210ENST00000541363 NDFIP2Q9NV92 336 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 PCDHA1Q9Y5I3 950 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 LRRC31Q6UY01 552 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 MAP3K1Q13233 1512 aa16.37■□□□□ 0.21
HMGA2-210ENST00000541363 SERPINB1P30740 379 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 ZAP70P43403 619 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 KRT17Q04695 432 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 P2RX5Q93086 422 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 PLEKHA8Q96JA3 519 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 YIPF2Q9BWQ6 316 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 SMARCAD1Q9H4L7 1026 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 GOLGA8TH3BQL2 631 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 KIF1CO43896 1103 aaKnown RBP16.36■□□□□ 0.21
HMGA2-210ENST00000541363 RASSF9O75901 435 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 KRT16P08779 473 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 GOLGA8HP0CJ92 632 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 CD58P19256 250 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 SNAP25P60880 206 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 KRT77Q7Z794 578 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 PPP1R14AQ96A00 147 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 AFF4Q9UHB7 1163 aaKnown RBP16.36■□□□□ 0.21
HMGA2-210ENST00000541363 BLOC1S6Q9UL45 172 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 SUPT3HB4E1H0 165 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 TK2O00142 265 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 HAUS5O94927 633 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 LLGL1Q15334 1064 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 E4F1Q66K89 784 aaPredicted RBP16.36■□□□□ 0.21
HMGA2-210ENST00000541363 POLIQ9UNA4 740 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 CENPAP49450 140 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 ICA1Q05084 483 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 SULF1Q8IWU6 871 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 COG1Q8WTW3 980 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 PCIF1Q9H4Z3 704 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 SYNGAP1Q96PV0 1343 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 TP53BP2Q13625 1128 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 ZNF197O14709 1029 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 ZNF827Q17R98 1081 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 ZNF658Q5TYW1 1059 aaPredicted RBP16.36■□□□□ 0.21
HMGA2-210ENST00000541363 TTC13Q8NBP0 860 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 C10orf88Q9H8K7 445 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 SOX13Q9UN79 622 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 ADGRF5Q8IZF2 1346 aa16.36■□□□□ 0.21
HMGA2-210ENST00000541363 ABCC1P33527 1531 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 MFN1Q8IWA4 741 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 EFHBQ8N7U6 833 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 FBXL5Q9UKA1 691 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 TCP10L2B9ZVM9 353 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 CCDC22O60826 627 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 CCNYL1Q8N7R7 359 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 GOLPH3LQ9H4A5 285 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 NPM3O75607 178 aaKnown RBP16.35■□□□□ 0.21
HMGA2-210ENST00000541363 ME3Q16798 604 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 CDHR1Q96JP9 859 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.35■□□□□ 0.21
HMGA2-210ENST00000541363 MYL1P05976 194 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 RCSD1Q6JBY9 416 aa16.35■□□□□ 0.21
HMGA2-210ENST00000541363 GTF2IP78347 998 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms