RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 KLHL7Q8IXQ5 586 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 ATP8B4Q8TF62 1192 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 CALR3Q96L12 384 aaKnown RBP10.42□□□□□ -0.74
CNOT4-212ENST00000541284 ATP6V1G3Q96LB4 118 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 SLC12A6Q9UHW9 1150 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 NOC2LQ9Y3T9 749 aaKnown RBP10.42□□□□□ -0.74
CNOT4-212ENST00000541284 A0A087WUV0 522 aaPredicted RBP10.42□□□□□ -0.74
CNOT4-212ENST00000541284 GTPBP10A4D1E9 387 aaKnown RBP10.42□□□□□ -0.74
CNOT4-212ENST00000541284 DDX3YO15523 660 aaKnown RBP10.42□□□□□ -0.74
CNOT4-212ENST00000541284 ANXA13P27216 316 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 NAP1L1P55209 391 aaKnown RBP10.42□□□□□ -0.74
CNOT4-212ENST00000541284 PPATQ06203 517 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 SLC15A2Q16348 729 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 NFIL3Q16649 462 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 PTPROQ16827 1216 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 CFAP58Q5T655 872 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 SLFN13Q68D06 897 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 MTMR14Q8NCE2 650 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 PBKQ96KB5 322 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 HSD17B14Q9BPX1 270 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 POLR3CQ9BUI4 534 aaPredicted RBP10.42□□□□□ -0.74
CNOT4-212ENST00000541284 WDR18Q9BV38 432 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 OLFML3Q9NRN5 406 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 PLAAQ9Y263 795 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 SAMM50Q9Y512 469 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 ZNFX1Q9P2E3 1918 aaKnown RBP10.42□□□□□ -0.74
CNOT4-212ENST00000541284 CYP3A4P08684 503 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 ZNF844Q08AG5 666 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 RPS6KA1Q15418 735 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 DOK7Q18PE1 504 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 KCNV1Q6PIU1 500 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 PPM1EQ8WY54 764 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 CCDC17Q96LX7 622 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 GLT8D2Q9H1C3 349 aa10.42□□□□□ -0.74
CNOT4-212ENST00000541284 SUCLA2Q9P2R7 463 aaPredicted RBP10.42□□□□□ -0.74
CNOT4-212ENST00000541284 WRAP73Q9P2S5 460 aaPredicted RBP10.42□□□□□ -0.74
CNOT4-212ENST00000541284 MYO1FO00160 1098 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 MPHOSPH10O00566 681 aaKnown RBP10.41□□□□□ -0.74
CNOT4-212ENST00000541284 PDE6BP35913 854 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 PTGISQ16647 500 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 RINT1Q6NUQ1 792 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 LRIG3Q6UXM1 1119 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 GMCL1P1Q8NEA9 526 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 OR2W6PQ8NHA6 318 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.41□□□□□ -0.745e-8■■■■■ 65.3
CNOT4-212ENST00000541284 AP1M1Q9BXS5 423 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 EPB41L4BQ9H329 900 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 EFCC1Q9HA90 598 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 RGL1Q9NZL6 768 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 BZW2Q9Y6E2 419 aaKnown RBP10.41□□□□□ -0.74
CNOT4-212ENST00000541284 ZBTB39O15060 712 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 SART1O43290 800 aaKnown RBP10.41□□□□□ -0.74
CNOT4-212ENST00000541284 CRKP46108 304 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 COG2Q14746 738 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 STRIP1Q5VSL9 837 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 C1orf186Q6ZWK4 172 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 GMCL1Q96IK5 515 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 EIF2AK1Q9BQI3 630 aaKnown RBP10.41□□□□□ -0.74
CNOT4-212ENST00000541284 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.41□□□□□ -0.742e-7■■■□□ 14.8
CNOT4-212ENST00000541284 STRA6Q9BX79 667 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 VPS33BQ9H267 617 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 BHMT2Q9H2M3 363 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 DMAC2Q9NW81 257 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 INTUQ9ULD6 942 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 TTC7AQ9ULT0 858 aaPredicted RBP10.41□□□□□ -0.74
CNOT4-212ENST00000541284 F8VZ95 297 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 EYA4O95677 639 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 NR1D1P20393 614 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 NPEPPSP55786 919 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 SKIDA1Q1XH10 827 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 KIAA1755Q5JYT7 1200 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 MEX3CQ5U5Q3 659 aaKnown RBP10.41□□□□□ -0.74
CNOT4-212ENST00000541284 NAA35Q5VZE5 725 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 BTNL9Q6UXG8 535 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 PALB2Q86YC2 1186 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 FAM20AQ96MK3 541 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 PSMD1Q99460 953 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 DDX47Q9H0S4 455 aaKnown RBP10.41□□□□□ -0.74
CNOT4-212ENST00000541284 EPN3Q9H201 632 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 OSGEPQ9NPF4 335 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 LUC7LQ9NQ29 371 aaKnown RBP10.41□□□□□ -0.74
CNOT4-212ENST00000541284 GCNT4Q9P109 453 aa10.41□□□□□ -0.74
CNOT4-212ENST00000541284 A0A1W2PRG0 241 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 CLIC2O15247 247 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 NDUFB10O96000 172 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 XRCC5P13010 732 aaKnown RBP10.4□□□□□ -0.74
CNOT4-212ENST00000541284 TNNC1P63316 161 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 GHRHRQ02643 423 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 CYP4A11Q02928 519 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 TTC31Q49AM3 519 aaPredicted RBP10.4□□□□□ -0.74
CNOT4-212ENST00000541284 CBWD6Q4V339 395 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 CBWD3Q5JTY5 395 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 CBWD5Q5RIA9 395 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 C6orf89Q6UWU4 347 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 PODNQ7Z5L7 613 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 LMO3Q8TAP4 145 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 DEFB129Q9H1M3 183 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 CNOT8Q9UFF9 292 aaKnown RBP10.4□□□□□ -0.74
CNOT4-212ENST00000541284 SERPINA10Q9UK55 444 aa10.4□□□□□ -0.74
CNOT4-212ENST00000541284 DNM3Q9UQ16 869 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms