RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 FAM212AQ96EL1 285 aa11.27□□□□□ -0.6
CDC42SE1-207ENST00000540998 SH2D3AQ9BRG2 576 aa11.27□□□□□ -0.6
CDC42SE1-207ENST00000540998 EDEM3Q9BZQ6 932 aa11.27□□□□□ -0.6
CDC42SE1-207ENST00000540998 THAP2Q9H0W7 228 aa11.27□□□□□ -0.6
CDC42SE1-207ENST00000540998 COG5Q9UP83 839 aa11.27□□□□□ -0.6
CDC42SE1-207ENST00000540998 TCRBV7S2A1N4TA0A589 114 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 EML1O00423 815 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 CTNND1O60716 968 aaKnown RBP11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 RASSF9O75901 435 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 LDHCP07864 332 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 KRT13P13646 458 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 ADCY1Q08828 1119 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 LRRC14Q15048 493 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 KNOP1Q1ED39 458 aaKnown RBP11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 CBWD6Q4V339 395 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 CBWD3Q5JTY5 395 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 CBWD5Q5RIA9 395 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 EP400NLQ6ZTU2 488 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 FBXO25Q8TCJ0 367 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 MGARPQ8TDB4 240 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 ACTRT1Q8TDG2 376 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 SLC20A1Q8WUM9 679 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 BTBD6Q96KE9 485 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 POP1Q99575 1024 aaKnown RBP11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 ANO3Q9BYT9 981 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 EPB41L4BQ9H329 900 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 ZNF287Q9HBT7 754 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 PTPN22Q9Y2R2 807 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 CD2APQ9Y5K6 639 aa11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 COL16A1Q07092 1604 aaPredicted RBP11.27□□□□□ -0.61
CDC42SE1-207ENST00000540998 ANKRD63C9JTQ0 380 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 RPSAP08865 295 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 SCTRP47872 440 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 FAM133BQ5BKY9 247 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 MAST2Q6P0Q8 1798 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 CYB5D1Q6P9G0 228 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 CCDC91Q7Z6B0 441 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 ZDHHC14Q8IZN3 488 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 EPS8L3Q8TE67 593 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 AZI2Q9H6S1 392 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 TPX2Q9ULW0 747 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 PPP1R12BO60237 982 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 CALCAP01258 141 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 CHN1P15882 459 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 CREB1P16220 341 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 CDC25CP30307 473 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 DOK7Q18PE1 504 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 ASPRV1Q53RT3 343 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 MICALCLQ6ZW33 695 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 FUKQ8N0W3 1084 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 RNF25Q96BH1 459 aaPredicted RBP11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 FAM84AQ96KN4 292 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 NUCKS1Q9H1E3 243 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 GEMIN8Q9NWZ8 242 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 STXBP5LQ9Y2K9 1186 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 ZBTB5O15062 677 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 FLOT1O75955 427 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 SCP2P22307 547 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 SHMT1P34896 483 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 KCNJ1P48048 391 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 SPIRE1Q08AE8 756 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 CUL1Q13616 776 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 CCDC25Q86WR0 208 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 CERS5Q8N5B7 392 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 CNBD1Q8NA66 436 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 LRRC45Q96CN5 670 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 FMO2Q99518 471 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 SEMA4AQ9H3S1 761 aa11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 DBR1Q9UK59 544 aaKnown RBP11.26□□□□□ -0.61
CDC42SE1-207ENST00000540998 TTLL1O95922 423 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 DRD4P21917 467 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 PDE6BP35913 854 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 MRPL12P52815 198 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 IKQ13123 557 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 DRAP1Q14919 205 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 ACCSLQ4AC99 568 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 CACNA2D3Q8IZS8 1091 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 SPICE1Q8N0Z3 855 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 ZSWIM2Q8NEG5 633 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 HVCN1Q96D96 273 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 PBKQ96KB5 322 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 PSMD1Q99460 953 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 YY1AP1Q9H869 796 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 KCNQ5Q9NR82 932 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 CCNL1Q9UK58 526 aaPredicted RBP11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 TGFB1I1O43294 461 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 PLCG2P16885 1265 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 SMTNP53814 917 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 MARSP56192 900 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 ARHGAP4P98171 946 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 SLC29A2Q14542 456 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 TATDN2Q93075 761 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 KCNMB3Q9NPA1 279 aa11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 UTP11Q9Y3A2 253 aaKnown RBP11.25□□□□□ -0.61
CDC42SE1-207ENST00000540998 EIF4E1BA6NMX2 242 aaKnown RBP11.24□□□□□ -0.61
CDC42SE1-207ENST00000540998 MEIS2O14770 477 aa11.24□□□□□ -0.61
CDC42SE1-207ENST00000540998 DDX3YO15523 660 aaKnown RBP11.24□□□□□ -0.61
CDC42SE1-207ENST00000540998 GDF11O95390 407 aa11.24□□□□□ -0.61
CDC42SE1-207ENST00000540998 GNA14O95837 355 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms