RNA–Protein interactions for RNA: ENST00000540367.5

CPT1A-206, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-206ENST00000540367 MARCH6O60337 910 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 ATP6V1G2O95670 118 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 FGGP02679 453 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 LDHCP07864 332 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 MMEP08473 750 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 CHN1P15882 459 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 MMP13P45452 471 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 CLK2P49760 499 aaKnown RBP12.19□□□□□ -0.46
CPT1A-206ENST00000540367 E2F5Q15329 346 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 EPHA7Q15375 998 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 UBE2SQ16763 222 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 ASPRV1Q53RT3 343 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 TLDC1Q6P9B6 456 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 ATXN2LQ8WWM7 1075 aaKnown RBP12.19□□□□□ -0.46
CPT1A-206ENST00000540367 PGM2Q96G03 612 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 RTFDC1Q9BY42 306 aaPredicted RBP12.19□□□□□ -0.46
CPT1A-206ENST00000540367 ZDHHC18Q9NUE0 388 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 SLC12A4Q9UP95 1085 aa12.19□□□□□ -0.46
CPT1A-206ENST00000540367 NCANO14594 1321 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 POTEB3A0JP26 581 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 POTECB2RU33 542 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 SLC26A4O43511 780 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 XRCC5P13010 732 aaKnown RBP12.18□□□□□ -0.46
CPT1A-206ENST00000540367 IBSPP21815 317 aaPredicted RBP12.18□□□□□ -0.46
CPT1A-206ENST00000540367 SCP2P22307 547 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 PPP2R5EQ16537 467 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 DUPD1Q68J44 220 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 POTEBQ6S5H4 581 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 FAM196AQ6ZSG2 479 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 NEK9Q8TD19 979 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 NLRP3Q96P20 1036 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 SETDB2Q96T68 719 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 TRIM31Q9BZY9 425 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 NOD2Q9HC29 1040 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 SIX2Q9NPC8 291 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 AJAP1Q9UKB5 411 aaPredicted RBP12.18□□□□□ -0.46
CPT1A-206ENST00000540367 DIS3Q9Y2L1 958 aaKnown RBP12.18□□□□□ -0.46
CPT1A-206ENST00000540367 SHBGP04278 402 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 KRT18P05783 430 aaKnown RBP12.18□□□□□ -0.46
CPT1A-206ENST00000540367 CASP5P51878 434 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 DR1Q01658 176 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 CRYMQ14894 314 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 HIBCHQ6NVY1 386 aaPredicted RBP12.18□□□□□ -0.46
CPT1A-206ENST00000540367 PIGWQ7Z7B1 504 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 U2AF1L4Q8WU68 220 aaKnown RBP12.18□□□□□ -0.46
CPT1A-206ENST00000540367 ERP44Q9BS26 406 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 ADAM7Q9H2U9 754 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 PABPC3Q9H361 631 aaKnown RBP12.18□□□□□ -0.46
CPT1A-206ENST00000540367 NR2E1Q9Y466 385 aa12.18□□□□□ -0.46
CPT1A-206ENST00000540367 DDX3YO15523 660 aaKnown RBP12.17□□□□□ -0.46
CPT1A-206ENST00000540367 BUB1BO60566 1050 aaPredicted RBP12.17□□□□□ -0.46
CPT1A-206ENST00000540367 GFPT2O94808 682 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 FERP16591 822 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 PMS2P54278 862 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 GALCP54803 685 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 PPP1R7Q15435 360 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 KNOP1Q1ED39 458 aaKnown RBP12.17□□□□□ -0.46
CPT1A-206ENST00000540367 ARSHQ5FYA8 562 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 DCAF17Q5H9S7 520 aaPredicted RBP12.17□□□□□ -0.46
CPT1A-206ENST00000540367 MEX3CQ5U5Q3 659 aaKnown RBP12.17□□□□□ -0.46
CPT1A-206ENST00000540367 DCAF12L1Q5VU92 463 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 CUL5Q93034 780 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 SELENOSQ9BQE4 189 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 DAAM1Q9Y4D1 1078 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 FAM187AA6NFU0 413 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 CCDC169A6NNP5 214 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 BTDP43251 543 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 SLC12A3P55017 1021 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 KLRC3Q07444 240 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 DENND2CQ68D51 928 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 CCDC63Q8NA47 563 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 RFFLQ8WZ73 363 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 NAP1L3Q99457 506 aaPredicted RBP12.17□□□□□ -0.46
CPT1A-206ENST00000540367 NAP1L4Q99733 375 aaKnown RBP12.17□□□□□ -0.46
CPT1A-206ENST00000540367 MXD3Q9BW11 206 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 CARD9Q9H257 536 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 DHX36Q9H2U1 1008 aaKnown RBP12.17□□□□□ -0.46
CPT1A-206ENST00000540367 ZHX3Q9H4I2 956 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 CCDC134Q9H6E4 229 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 GCNT4Q9P109 453 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 PLIN4Q96Q06 1357 aa12.17□□□□□ -0.46
CPT1A-206ENST00000540367 PNMA6FA0A0J9YX94 578 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 GOLGA6L10A0A0M3HER8 536 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 A0A1B0GUA9 196 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 SPDYE3A6NKU9 549 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 PDXKO00764 312 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 CALUO43852 315 aaPredicted RBP12.16□□□□□ -0.46
CPT1A-206ENST00000540367 SNHG28P0DPA3 235 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 TM4SF1P30408 202 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 PPATQ06203 517 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 RIPK1Q13546 671 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 DHX34Q14147 1143 aaKnown RBP12.16□□□□□ -0.46
CPT1A-206ENST00000540367 CRELD2Q6UXH1 353 aaPredicted RBP12.16□□□□□ -0.46
CPT1A-206ENST00000540367 EPM2AIP1Q7L775 607 aaPredicted RBP12.16□□□□□ -0.46
CPT1A-206ENST00000540367 TEX11Q8IYF3 940 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 SLC30A5Q8TAD4 765 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 OLIG1Q8TAK6 271 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 LNX1Q8TBB1 728 aaPredicted RBP12.16□□□□□ -0.46
CPT1A-206ENST00000540367 NYXQ9GZU5 481 aa12.16□□□□□ -0.46
CPT1A-206ENST00000540367 METTL14Q9HCE5 456 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms