RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 PYM1Q9BRP8 204 aaKnown RBP11.89□□□□□ -0.51
PBX1-212ENST00000540236 ISCUQ9H1K1 167 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 HSD3B7Q9H2F3 369 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 GJC2Q5T442 439 aaPredicted RBP11.89□□□□□ -0.51
PBX1-212ENST00000540236 NSMFQ6X4W1 530 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 KLHL25Q9H0H3 589 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 ASCC2Q9H1I8 757 aaPredicted RBP11.89□□□□□ -0.51
PBX1-212ENST00000540236 BTBD7Q9P203 1132 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.89□□□□□ -0.51
PBX1-212ENST00000540236 VIL1P09327 827 aaKnown RBP11.89□□□□□ -0.51
PBX1-212ENST00000540236 EPB41P11171 864 aaKnown RBP11.89□□□□□ -0.51
PBX1-212ENST00000540236 NAPAP54920 295 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 AMPD2Q01433 879 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 CCDC15Q0P6D6 951 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 XRCC4Q13426 336 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 APOA5Q6Q788 366 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 SAPCD2Q86UD0 394 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 SCUBE1Q8IWY4 988 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 EFCAB3Q8N7B9 438 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 HAUS7Q99871 368 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 SEC63Q9UGP8 760 aaKnown RBP11.89□□□□□ -0.51
PBX1-212ENST00000540236 REXO2Q9Y3B8 237 aaKnown RBP11.89□□□□□ -0.51
PBX1-212ENST00000540236 UHRF1BP1LA0JNW5 1464 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 NBPF26B4DH59 902 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 EXOC3O60645 756 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 LCA5LO95447 670 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 ERVK-9P63128 1117 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 AGGF1Q8N302 714 aaeCLIP11.89□□□□□ -0.51
PBX1-212ENST00000540236 GALNT15Q8N3T1 639 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 NBPF15Q8N660 670 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 NDST4Q9H3R1 872 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 Q9H521 79 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 DMAP1Q9NPF5 467 aaPredicted RBP11.89□□□□□ -0.51
PBX1-212ENST00000540236 HDAC9Q9UKV0 1011 aa11.89□□□□□ -0.51
PBX1-212ENST00000540236 ATP6V1C1P21283 382 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 ANKRD40Q6AI12 368 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 RFWD3Q6PCD5 774 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 C1orf54Q8WWF1 131 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 THAP9Q9H5L6 903 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 TCEAL9Q9UHQ7 104 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 ANAPC5Q9UJX4 755 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 NEDD4P46934 1319 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 PASKQ96RG2 1323 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 PHBP35232 272 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 PMS1P54277 932 aaKnown RBP11.88□□□□□ -0.51
PBX1-212ENST00000540236 SH3BGRP55822 239 aaPredicted RBP11.88□□□□□ -0.51
PBX1-212ENST00000540236 KCNQ4P56696 695 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 ZYXQ15942 572 aaKnown RBP11.88□□□□□ -0.51
PBX1-212ENST00000540236 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 NCAPG2Q86XI2 1143 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 BORCS6Q96GS4 357 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 L3MBTL3Q96JM7 780 aaPredicted RBP11.88□□□□□ -0.51
PBX1-212ENST00000540236 EXOC1LA0A1B0GW35 172 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 R3HDM1Q15032 1099 aaKnown RBP11.88□□□□□ -0.51
PBX1-212ENST00000540236 CCDC80Q76M96 950 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 CADPS2Q86UW7 1296 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 USP38Q8NB14 1042 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 PBKQ96KB5 322 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 COQ7Q99807 217 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 NUF2Q9BZD4 464 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 GDF3Q9NR23 364 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 CEP72Q9P209 647 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 ASAP1Q9ULH1 1129 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 UBN2Q6ZU65 1347 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 CALB2P22676 271 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 RTP1P59025 263 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 SELENONQ9NZV5 590 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 ABCC10Q5T3U5 1492 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 DPYDQ12882 1025 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 NXNQ6DKJ4 435 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 RNF207Q6ZRF8 634 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 RNPEPQ9H4A4 650 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 EURLQ9NYK6 297 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 STRIP2Q9ULQ0 834 aa11.88□□□□□ -0.51
PBX1-212ENST00000540236 RTN2O75298 545 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 LRRN2O75325 713 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 SERPING1P05155 500 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 NELFEP18615 380 aaKnown RBP11.87□□□□□ -0.51
PBX1-212ENST00000540236 CARTPTQ16568 116 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 PARP2Q9UGN5 583 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 ZNF532Q9HCE3 1301 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 REREQ9P2R6 1566 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 PLA2R1Q13018 1463 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 SHANK2Q9UPX8 1470 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 E7ENQ6 273 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 KRT5P13647 590 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 EEF1DP29692 281 aaKnown RBP11.87□□□□□ -0.51
PBX1-212ENST00000540236 PRR23CQ6ZRP0 262 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 TBC1D10CQ8IV04 446 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 PHTF1Q9UMS5 762 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 MAST1Q9Y2H9 1570 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 MAB21L3Q8N8X9 362 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 RXFP1Q9HBX9 757 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 TTC7AQ9ULT0 858 aaPredicted RBP11.87□□□□□ -0.51
PBX1-212ENST00000540236 IFNB1P01574 187 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 GSTA1P08263 222 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 CIITAP33076 1130 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 MTMR2Q13614 643 aa11.87□□□□□ -0.51
PBX1-212ENST00000540236 SGSM1Q2NKQ1 1148 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms