RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ZNF318Q5VUA4 2279 aa14.17□□□□□ -0.14
VAMP1-206ENST00000538970 C19orf67A6NJJ6 358 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 WDR64B1ANS9 1081 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 C9IYK1 514 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 GPR182O15218 404 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 MSH4O15457 936 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 EDIL3O43854 480 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 GPR32O75388 356 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 REC8O95072 547 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 VTNP04004 478 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 PSMA5P28066 241 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 PDIA3P30101 505 aaKnown RBP14.16□□□□□ -0.14
VAMP1-206ENST00000538970 IRS1P35568 1242 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 CRYBB1P53674 252 aaPredicted RBP14.16□□□□□ -0.14
VAMP1-206ENST00000538970 SMAD2Q15796 467 aaKnown RBP14.16□□□□□ -0.14
VAMP1-206ENST00000538970 SLC24A5Q71RS6 500 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 ADHFE1Q8IWW8 467 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 METTL13Q8N6R0 699 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 LINC01465Q8N7H1 131 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 POF1BQ8WVV4 589 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 FAM167AQ96KS9 214 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 IGFLR1Q9H665 355 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 NCOA5Q9HCD5 579 aaKnown RBP14.16□□□□□ -0.14
VAMP1-206ENST00000538970 SAMM50Q9Y512 469 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 PCDHB7Q9Y5E2 793 aa14.16□□□□□ -0.14
VAMP1-206ENST00000538970 LOXHD1Q8IVV2 1947 aa14.15□□□□□ -0.14
VAMP1-206ENST00000538970 MBTPS2O43462 519 aa14.15□□□□□ -0.14
VAMP1-206ENST00000538970 ZNF862O60290 1169 aa14.15□□□□□ -0.14
VAMP1-206ENST00000538970 OATP04181 439 aa14.15□□□□□ -0.14
VAMP1-206ENST00000538970 CLCN3P51790 818 aa14.15□□□□□ -0.14
VAMP1-206ENST00000538970 CCT2P78371 535 aaKnown RBP14.15□□□□□ -0.14
VAMP1-206ENST00000538970 ADAM15Q13444 863 aa14.15□□□□□ -0.14
VAMP1-206ENST00000538970 SMAD4Q13485 552 aaKnown RBP14.15□□□□□ -0.14
VAMP1-206ENST00000538970 TOB2Q14106 344 aaPredicted RBP14.15□□□□□ -0.14
VAMP1-206ENST00000538970 IER5LQ5T953 404 aa14.15□□□□□ -0.14
VAMP1-206ENST00000538970 TRMT1LQ7Z2T5 733 aaKnown RBP14.15□□□□□ -0.14
VAMP1-206ENST00000538970 ADGRD2Q7Z7M1 963 aa14.15□□□□□ -0.14
VAMP1-206ENST00000538970 PPP2R3CQ969Q6 453 aa14.15□□□□□ -0.14
VAMP1-206ENST00000538970 CCDC136Q96JN2 1154 aa14.15□□□□□ -0.14
VAMP1-206ENST00000538970 SH3GLB2Q9NR46 395 aa14.15□□□□□ -0.14
VAMP1-206ENST00000538970 RNF216Q9NWF9 866 aaPredicted RBP14.15□□□□□ -0.14
VAMP1-206ENST00000538970 C5orf42Q9H799 3197 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 TBKBP1A7MCY6 615 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 MAGEB2O15479 319 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 ST18O60284 1047 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 USP11P51784 963 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 PRKCEQ02156 737 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 DSC3Q14574 896 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 UGCGQ16739 394 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 FAM102BQ5T8I3 360 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 RUFY3Q7L099 469 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 EFHBQ8N7U6 833 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 SLC5A5Q92911 643 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 MSLNLQ96KJ4 702 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 MAP7D2Q96T17 732 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 RIT2Q99578 217 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 ELAC1Q9H777 363 aaKnown RBP14.14□□□□□ -0.15
VAMP1-206ENST00000538970 DISC1Q9NRI5 854 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 TMEM161AQ9NX61 479 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 HCSTQ9UBK5 93 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 CD207Q9UJ71 328 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 PCDHGC5Q9Y5F6 944 aa14.14□□□□□ -0.15
VAMP1-206ENST00000538970 MYO7AQ13402 2215 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 PLXNA4Q9HCM2 1894 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 EPB41L2O43491 1005 aaKnown RBP14.13□□□□□ -0.15
VAMP1-206ENST00000538970 CHMP2AO43633 222 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 GAS7O60861 476 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 FGFR1P11362 822 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 SFNP31947 248 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 NRIP1P48552 1158 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 NDUFV1P49821 464 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 JAK3P52333 1124 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 NLRP11P59045 1033 aaKnown RBP14.13□□□□□ -0.15
VAMP1-206ENST00000538970 NLRP5P59047 1200 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 FAM189BP81408 668 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 UBE3AQ05086 875 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 EFCAB12Q6NXP0 572 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 TRIM22Q8IYM9 498 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 LRRC71Q8N4P6 559 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 TBCKQ8TEA7 893 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 POP1Q99575 1024 aaKnown RBP14.13□□□□□ -0.15
VAMP1-206ENST00000538970 TEKT3Q9BXF9 490 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 ADAMTS10Q9H324 1103 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 UNC45AQ9H3U1 944 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 ATP6V0A4Q9HBG4 840 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 ZSWIM6Q9HCJ5 1215 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 AAASQ9NRG9 546 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 CLEC1BQ9P126 229 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 AKT3Q9Y243 479 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 PCDHB12Q9Y5F1 795 aa14.13□□□□□ -0.15
VAMP1-206ENST00000538970 FNDC1Q4ZHG4 1894 aaPredicted RBP14.12□□□□□ -0.15
VAMP1-206ENST00000538970 EYA4O95677 639 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 GLP2RO95838 553 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 TMOD1P28289 359 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 Q4G0T1 1027 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 SPOUT1Q5T280 376 aaKnown RBP14.12□□□□□ -0.15
VAMP1-206ENST00000538970 LRCH2Q5VUJ6 765 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 ZNF710Q8N1W2 664 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 COLGALT1Q8NBJ5 622 aa14.12□□□□□ -0.15
VAMP1-206ENST00000538970 GJA10Q969M2 543 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms