RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 TRPV2Q9Y5S1 764 aa9.45□□□□□ -0.9
SPARC-208ENST00000538026 DDX11L8A8MPP1 907 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 NEMFO60524 1076 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 LPXNO60711 386 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 CSDE1O75534 798 aaKnown RBP9.44□□□□□ -0.9
SPARC-208ENST00000538026 P4HBP07237 508 aaKnown RBP9.44□□□□□ -0.9
SPARC-208ENST00000538026 TXKP42681 527 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 QARSP47897 775 aaKnown RBP9.44□□□□□ -0.9
SPARC-208ENST00000538026 PSMC5P62195 406 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 CYP4A11Q02928 519 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 MTERF2Q49AM1 385 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 NCAPH2Q6IBW4 605 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 TSHZ1Q6ZSZ6 1077 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 FAM228AQ86W67 206 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 KSR1Q8IVT5 923 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 METTL13Q8N6R0 699 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 USP38Q8NB14 1042 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 FAM184AQ8NB25 1140 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 FAM167AQ96KS9 214 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 OSMRQ99650 979 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 EIF2AK1Q9BQI3 630 aaKnown RBP9.44□□□□□ -0.9
SPARC-208ENST00000538026 LXNQ9BS40 222 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 MTIF3Q9H2K0 278 aaKnown RBP9.44□□□□□ -0.9
SPARC-208ENST00000538026 PRDM12Q9H4Q4 367 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 TTC12Q9H892 705 aaPredicted RBP9.44□□□□□ -0.9
SPARC-208ENST00000538026 CERS4Q9HA82 394 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 UPF2Q9HAU5 1272 aaKnown RBP9.44□□□□□ -0.9
SPARC-208ENST00000538026 BRMS1Q9HCU9 246 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 NRBP2Q9NSY0 501 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 MSRAQ9UJ68 235 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 PCDHA12Q9UN75 941 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 SQORQ9Y6N5 450 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 FNDC1Q4ZHG4 1894 aaPredicted RBP9.44□□□□□ -0.9
SPARC-208ENST00000538026 ATG2AQ2TAZ0 1938 aa9.44□□□□□ -0.9
SPARC-208ENST00000538026 NLRC5Q86WI3 1866 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 LINC01553A4QN01 128 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 POTEMA6NI47 508 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 MAGEB2O15479 319 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 TLL1O43897 1013 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 MAFO75444 373 aaPredicted RBP9.43□□□□□ -0.9
SPARC-208ENST00000538026 MED24O75448 989 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 MCM2P49736 904 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 GPC3P51654 580 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 NLRP11P59045 1033 aaKnown RBP9.43□□□□□ -0.9
SPARC-208ENST00000538026 DSC3Q14574 896 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 SAFBQ15424 915 aaKnown RBP eCLIP9.43□□□□□ -0.9
SPARC-208ENST00000538026 RAB30Q15771 203 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 TTC38Q5R3I4 469 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 IER5Q5VY09 327 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 RSPH3Q86UC2 560 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 C4orf19Q8IY42 314 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 SLFN12Q8IYM2 578 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 MYOCDQ8IZQ8 938 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 SP7Q8TDD2 431 aaPredicted RBP9.43□□□□□ -0.9
SPARC-208ENST00000538026 RAD9AQ99638 391 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 NAP1L4Q99733 375 aaKnown RBP9.43□□□□□ -0.9
SPARC-208ENST00000538026 TSPYL2Q9H2G4 693 aaPredicted RBP9.43□□□□□ -0.9
SPARC-208ENST00000538026 DHX33Q9H6R0 707 aaKnown RBP9.43□□□□□ -0.9
SPARC-208ENST00000538026 SUGCTQ9HAC7 445 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 XPNPEP1Q9NQW7 623 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 CYP26B1Q9NR63 512 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 SEPT9Q9UHD8 586 aaPredicted RBP9.43□□□□□ -0.9
SPARC-208ENST00000538026 ST3GAL5Q9UNP4 418 aa9.43□□□□□ -0.9
SPARC-208ENST00000538026 KIAA1671Q9BY89 1806 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 EFCAB14O75071 495 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 UPP2O95045 317 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 LYPLA2O95372 231 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 FGFR4P22455 802 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 YWHABP31946 246 aaKnown RBP9.42□□□□□ -0.9
SPARC-208ENST00000538026 TECP42680 631 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 KCNJ6P48051 423 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 TRAPPC10P48553 1259 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 GATMP50440 423 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 CRYBB1P53674 252 aaPredicted RBP9.42□□□□□ -0.9
SPARC-208ENST00000538026 PPP2R2DQ66LE6 453 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 CATSPER3Q86XQ3 398 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 TPH2Q8IWU9 490 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 IL27Q8NEV9 243 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 APBB2Q92870 758 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 TNPO1Q92973 898 aaKnown RBP9.42□□□□□ -0.9
SPARC-208ENST00000538026 ZNF689Q96CS4 500 aaPredicted RBP9.42□□□□□ -0.9
SPARC-208ENST00000538026 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.42□□□□□ -0.9
SPARC-208ENST00000538026 RNF19AQ9NV58 838 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 CEP131Q9UPN4 1083 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 GINS2Q9Y248 185 aa9.42□□□□□ -0.9
SPARC-208ENST00000538026 PP2D1A8MPX8 630 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 C9IYK1 514 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 RPS6KA5O75582 802 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 BAG4O95429 457 aaKnown RBP9.41□□□□□ -0.9
SPARC-208ENST00000538026 RPLP2P05387 115 aaKnown RBP9.41□□□□□ -0.9
SPARC-208ENST00000538026 OR52Z1P0C646 297 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 DARSP14868 501 aaKnown RBP9.41□□□□□ -0.9
SPARC-208ENST00000538026 ERVK-21P61565 698 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 FAM189BP81408 668 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 TBC1D8BQ0IIM8 1120 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 PTGDRQ13258 359 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 PIGOQ8TEQ8 1089 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 LRRC15Q8TF66 581 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 TMEM143Q96AN5 459 aa9.41□□□□□ -0.9
SPARC-208ENST00000538026 C17orf80Q9BSJ5 609 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms