RNA–Protein interactions for RNA: ENST00000537686.5

GGA3-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA3, Length 4,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-201ENST00000537686 FGFR2P21802 821 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 USP11P51784 963 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 EZH2Q15910 746 aaKnown RBP10.87□□□□□ -0.67
GGA3-201ENST00000537686 C10orf76Q5T2E6 689 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 OR6B2Q6IFH4 312 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 TOGARAM2Q6ZUX3 1019 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.87□□□□□ -0.67
GGA3-201ENST00000537686 SH2D3AQ9BRG2 576 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 TRIM9Q9C026 710 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 LRRC4Q9HBW1 653 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 FAM114A2Q9NRY5 505 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 RGL1Q9NZL6 768 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 GABBR1Q9UBS5 961 aa10.87□□□□□ -0.67
GGA3-201ENST00000537686 MYCP01106 439 aaPredicted RBP10.86□□□□□ -0.67
GGA3-201ENST00000537686 TROVE2P10155 538 aaKnown RBP eCLIP10.86□□□□□ -0.67
GGA3-201ENST00000537686 FDPSP14324 419 aaKnown RBP10.86□□□□□ -0.67
GGA3-201ENST00000537686 GBP1P32455 592 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 HMGCS2P54868 508 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 ITKQ08881 620 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 HPS3Q969F9 1004 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 ZNF668Q96K58 619 aaPredicted RBP10.86□□□□□ -0.67
GGA3-201ENST00000537686 LXNQ9BS40 222 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 CCSER1Q9C0I3 900 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 RNF181Q9P0P0 153 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 ZNRF3Q9ULT6 936 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 AK9Q5TCS8 1911 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 KRT1P04264 644 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 HSPA6P17066 643 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 GTF2A1P52655 376 aaPredicted RBP10.86□□□□□ -0.67
GGA3-201ENST00000537686 SLC7A5Q01650 507 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 DHX9Q08211 1270 aaKnown RBP10.86□□□□□ -0.67
GGA3-201ENST00000537686 PSMD6Q15008 389 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 RINT1Q6NUQ1 792 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 SWSAP1Q6NVH7 229 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 DEFB132Q7Z7B7 95 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 BPIFA3Q9BQP9 254 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 AP1M1Q9BXS5 423 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 HAUS2Q9NVX0 235 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 GMNNO75496 209 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 SAT1P21673 171 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 APBA1Q02410 837 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 ZNF667Q5HYK9 610 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 TTC19Q6DKK2 380 aaPredicted RBP10.86□□□□□ -0.67
GGA3-201ENST00000537686 CDC42EP5Q6NZY7 148 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 CCNYQ8ND76 341 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 NEK9Q8TD19 979 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 PSPC1Q8WXF1 523 aaKnown RBP10.86□□□□□ -0.67
GGA3-201ENST00000537686 PBKQ96KB5 322 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 PHF20Q9BVI0 1012 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 ATP6V0A4Q9HBG4 840 aa10.86□□□□□ -0.67
GGA3-201ENST00000537686 NGRNQ9NPE2 291 aaKnown RBP10.86□□□□□ -0.67
GGA3-201ENST00000537686 ECEL1O95672 775 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 ATP11AP98196 1134 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 ADCY1Q08828 1119 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 SURF1Q15526 300 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 FAM213AQ9BRX8 229 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 KLHL14Q9P2G3 628 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 STRCQ7RTU9 1775 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 SH3BP5O60239 455 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 TRIM49P0CI25 452 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 TRIM49CP0CI26 452 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 CLCN6P51797 869 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 MYO1EQ12965 1108 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 TXNRD3Q86VQ6 643 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 AFAP1L2Q8N4X5 818 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 EIF2AK1Q9BQI3 630 aaKnown RBP10.85□□□□□ -0.67
GGA3-201ENST00000537686 CEP72Q9P209 647 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 SEL1LQ9UBV2 794 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 BAIAP2L1Q9UHR4 511 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 SLIT2O94813 1529 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 BCL9LQ86UU0 1499 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 LDHAP00338 332 aaKnown RBP10.85□□□□□ -0.67
GGA3-201ENST00000537686 RNASELQ05823 741 aaKnown RBP10.85□□□□□ -0.67
GGA3-201ENST00000537686 RHOT2Q8IXI1 618 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 SLC38A10Q9HBR0 1119 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 INTS9Q9NV88 658 aaKnown RBP10.85□□□□□ -0.67
GGA3-201ENST00000537686 ADAM22Q9P0K1 906 aa10.85□□□□□ -0.67
GGA3-201ENST00000537686 ABT1Q9ULW3 272 aaKnown RBP10.85□□□□□ -0.67
GGA3-201ENST00000537686 MED7O43513 233 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 LPXNO60711 386 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 CTDNEP1O95476 244 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 TRIP13Q15645 432 aaPredicted RBP10.84□□□□□ -0.67
GGA3-201ENST00000537686 APOBEC3FQ8IUX4 373 aaKnown RBP10.84□□□□□ -0.67
GGA3-201ENST00000537686 GSDMBQ8TAX9 411 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 DPF2Q92785 391 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 ACAD9Q9H845 621 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 FAN1Q9Y2M0 1017 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 ADGRG1Q9Y653 693 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 PARP4Q9UKK3 1724 aaKnown RBP10.84□□□□□ -0.67
GGA3-201ENST00000537686 FGGP02679 453 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 INHBAP08476 426 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 ZSCAN20P17040 1043 aaPredicted RBP10.84□□□□□ -0.67
GGA3-201ENST00000537686 SFNP31947 248 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 SLCO1A2P46721 670 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 BASP1P80723 227 aaKnown RBP10.84□□□□□ -0.67
GGA3-201ENST00000537686 DMTNQ08495 405 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 NAALADL2Q58DX5 795 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 FBXO38Q6PIJ6 1188 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 FAM167AQ96KS9 214 aa10.84□□□□□ -0.67
GGA3-201ENST00000537686 HEXIM2Q96MH2 286 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms