RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 CXorf57Q6NSI4 855 aaKnown RBP7.04□□□□□ -1.28
PRKDC-208ENST00000536710 LRSAM1Q6UWE0 723 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 UNQ6494/PRO21346Q6UXR6 183 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 LIPIQ6XZB0 460 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 CMTR2Q8IYT2 770 aaKnown RBP7.04□□□□□ -1.28
PRKDC-208ENST00000536710 PPM1NQ8N819 430 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 IGDCC4Q8TDY8 1250 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 RAX2Q96IS3 184 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 WNT8AQ9H1J5 351 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 KCTD10Q9H3F6 313 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 ZNF552Q9H707 407 aaPredicted RBP7.04□□□□□ -1.28
PRKDC-208ENST00000536710 ZFP64Q9NPA5 681 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 GALNT8Q9NY28 637 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 ZBTB21Q9ULJ3 1066 aa7.04□□□□□ -1.28
PRKDC-208ENST00000536710 CCDC194A0A1B0GVG4 234 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 MPIG6BO95866 241 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 C8BP07358 591 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 VCAM1P19320 739 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 AGXTP21549 392 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 CYP2C19P33261 490 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 ECE1P42892 770 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 LGALS4P56470 323 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 CCT2P78371 535 aaKnown RBP7.03□□□□□ -1.28
PRKDC-208ENST00000536710 CDK17Q00537 523 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 MOGSQ13724 837 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 NOLC1Q14978 699 aaKnown RBP eCLIP7.03□□□□□ -1.28
PRKDC-208ENST00000536710 TMEM132EQ6IEE7 984 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 SLC4A10Q6U841 1118 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 AUTS2Q8WXX7 1259 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 CLIP3Q96DZ5 547 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 LIN37Q96GY3 246 aaPredicted RBP7.03□□□□□ -1.28
PRKDC-208ENST00000536710 DIRC2Q96SL1 478 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 AMNQ9BXJ7 453 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 HSPBP1Q9NZL4 362 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 ARHGAP20Q9P2F6 1191 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 DPP7Q9UHL4 492 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 USP18Q9UMW8 372 aa7.03□□□□□ -1.28
PRKDC-208ENST00000536710 HRKO00198 91 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 MAP4K4O95819 1239 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-208ENST00000536710 CYP2C8P10632 490 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 GNALP38405 381 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 MTNR1BP49286 362 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 SLC5A3P53794 718 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 MRPS9P82933 396 aaKnown RBP7.02□□□□□ -1.29
PRKDC-208ENST00000536710 PPARAQ07869 468 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 CACNB2Q08289 660 aaPredicted RBP7.02□□□□□ -1.29
PRKDC-208ENST00000536710 TARBP2Q15633 366 aaKnown RBP7.02□□□□□ -1.29
PRKDC-208ENST00000536710 MINDY4Q4G0A6 757 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 PHF19Q5T6S3 580 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 CBLL1Q75N03 491 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 PROSER1Q86XN7 944 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 CCAR1Q8IX12 1150 aaKnown RBP7.02□□□□□ -1.29
PRKDC-208ENST00000536710 MIER2Q8N344 545 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 CPA5Q8WXQ8 436 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 FAM168AQ92567 244 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 CSRNP2Q9H175 543 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 MTG2Q9H4K7 406 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 DLL4Q9NR61 685 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 NUMBLQ9Y6R0 609 aa7.02□□□□□ -1.29
PRKDC-208ENST00000536710 MYPNQ86TC9 1320 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 VSTM5A8MXK1 200 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 MAFGO15525 162 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 CAND2O75155 1236 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 KRT18P05783 430 aaKnown RBP7.01□□□□□ -1.29
PRKDC-208ENST00000536710 PFKLP17858 780 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 APEX1P27695 318 aaKnown RBP7.01□□□□□ -1.29
PRKDC-208ENST00000536710 THBS2P35442 1172 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 BCAR1P56945 870 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 SPIDRQ14159 915 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 KANSL1Q7Z3B3 1105 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 KCNK18Q7Z418 384 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 STK32CQ86UX6 486 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 SMARCC2Q8TAQ2 1214 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 SSH1Q8WYL5 1049 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 ZSWIM3Q96MP5 696 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 TMEM209Q96SK2 561 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 NUP88Q99567 741 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-208ENST00000536710 SYT3Q9BQG1 590 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 TACO1Q9BSH4 297 aaKnown RBP7.01□□□□□ -1.29
PRKDC-208ENST00000536710 RNF38Q9H0F5 515 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 OR10A5Q9H207 317 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 PRDM12Q9H4Q4 367 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 NSUN3Q9H649 340 aaKnown RBP7.01□□□□□ -1.29
PRKDC-208ENST00000536710 ZNF277Q9NRM2 450 aaPredicted RBP7.01□□□□□ -1.29
PRKDC-208ENST00000536710 SLC52A1Q9NWF4 448 aa7.01□□□□□ -1.29
PRKDC-208ENST00000536710 NDUFS2O75306 463 aa7□□□□□ -1.29
PRKDC-208ENST00000536710 ZRANB2O95218 330 aaKnown RBP eCLIP7□□□□□ -1.29
PRKDC-208ENST00000536710 C5AR1P21730 350 aa7□□□□□ -1.29
PRKDC-208ENST00000536710 KIF23Q02241 960 aaPredicted RBP7□□□□□ -1.29
PRKDC-208ENST00000536710 TRIM25Q14258 630 aaKnown RBP7□□□□□ -1.29
PRKDC-208ENST00000536710 MUM1Q2TAK8 710 aa7□□□□□ -1.29
PRKDC-208ENST00000536710 IFIT1BQ5T764 474 aaKnown RBP7□□□□□ -1.29
PRKDC-208ENST00000536710 MBNL2Q5VZF2 373 aaKnown RBP7□□□□□ -1.29
PRKDC-208ENST00000536710 LDHDQ86WU2 507 aa7□□□□□ -1.29
PRKDC-208ENST00000536710 DTX3Q8N9I9 347 aa7□□□□□ -1.29
PRKDC-208ENST00000536710 OR14C36Q8NHC7 312 aa7□□□□□ -1.29
PRKDC-208ENST00000536710 NOL10Q9BSC4 688 aaKnown RBP7□□□□□ -1.29
PRKDC-208ENST00000536710 BTBD2Q9BX70 525 aa7□□□□□ -1.29
PRKDC-208ENST00000536710 PCGF6Q9BYE7 350 aa7□□□□□ -1.29
PRKDC-208ENST00000536710 EPB41L4BQ9H329 900 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms