RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ZKSCAN4Q969J2 545 aaPredicted RBP14.65□□□□□ -0.06
VPS33B-202ENST00000535906 DRC1Q96MC2 740 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 PDE11AQ9HCR9 933 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 JRKLQ9Y4A0 524 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 ZHX2Q9Y6X8 837 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 ERICH4A6NGS2 130 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 FZD9O00144 591 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 HIP1RO75146 1068 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 P4HBP07237 508 aaKnown RBP14.65□□□□□ -0.06
VPS33B-202ENST00000535906 MCM3P25205 808 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 CASP8Q14790 479 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 PGM5Q15124 567 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 MAEAQ7L5Y9 396 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 NEK9Q8TD19 979 aa14.65□□□□□ -0.06
VPS33B-202ENST00000535906 A0A087X0T9 212 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 TARSL2A2RTX5 802 aaKnown RBP14.64□□□□□ -0.07
VPS33B-202ENST00000535906 PDE2AO00408 941 aaPredicted RBP14.64□□□□□ -0.07
VPS33B-202ENST00000535906 FAM228BP0C875 321 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 KLHL30Q0D2K2 578 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 SLC18A3Q16572 532 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 NFIL3Q16649 462 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 PADI6Q6TGC4 694 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 TRERF1Q96PN7 1200 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 MAP3K20Q9NYL2 800 aaKnown RBP14.64□□□□□ -0.07
VPS33B-202ENST00000535906 ADAMTS1Q9UHI8 967 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 SAMM50Q9Y512 469 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 RIPK3Q9Y572 518 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 VWA5AO00534 786 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 PSMC2P35998 433 aaKnown RBP14.64□□□□□ -0.07
VPS33B-202ENST00000535906 ASIC2Q16515 512 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 IRF2BP2Q7Z5L9 587 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 FAM186BQ8IYM0 893 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 ATG4CQ96DT6 458 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.64□□□□□ -0.07
VPS33B-202ENST00000535906 STRA6Q9BX79 667 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 SIX2Q9NPC8 291 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 SNX12Q9UMY4 172 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 LOXHD1Q8IVV2 1947 aa14.64□□□□□ -0.07
VPS33B-202ENST00000535906 BUB1O43683 1085 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 ATP9AO75110 1047 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 ZBED4O75132 1171 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 MYCLP12524 364 aaPredicted RBP14.63□□□□□ -0.07
VPS33B-202ENST00000535906 BACE1P56817 501 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 GBP6Q6ZN66 633 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 RBM46Q8TBY0 533 aaKnown RBP14.63□□□□□ -0.07
VPS33B-202ENST00000535906 RMDN3Q96TC7 470 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 SH2D3AQ9BRG2 576 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 AGPAT3Q9NRZ7 376 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 GCNT4Q9P109 453 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 AJAP1Q9UKB5 411 aaPredicted RBP14.63□□□□□ -0.07
VPS33B-202ENST00000535906 CTDP1Q9Y5B0 961 aaPredicted RBP14.63□□□□□ -0.07
VPS33B-202ENST00000535906 PPP1R37O75864 691 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 PTK2Q05397 1052 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 PLS1Q14651 629 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 NSMFQ6X4W1 530 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 RNF207Q6ZRF8 634 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 SCYL3Q8IZE3 742 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 TXLNBQ8N3L3 684 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 EXOC4Q96A65 974 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 SPAG5Q96R06 1193 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 WRNIP1Q96S55 665 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 PDCD2LQ9BRP1 358 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 DMAC2Q9NW81 257 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 ADAM21Q9UKJ8 722 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 PARP14Q460N5 1801 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 UBE4BO95155 1302 aa14.63□□□□□ -0.07
VPS33B-202ENST00000535906 DOCK1Q14185 1865 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 PTPRAP18433 802 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 QARSP47897 775 aaKnown RBP14.62□□□□□ -0.07
VPS33B-202ENST00000535906 RARRES1P49788 294 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 CYP2J2P51589 502 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 IQCEQ6IPM2 695 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 GJB7Q6PEY0 223 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 STXBP4Q6ZWJ1 553 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 HS2ST1Q7LGA3 356 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 CREG2Q8IUH2 290 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 CAGE1Q8TC20 777 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 COG1Q8WTW3 980 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 ALS2CR12Q96Q35 445 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 PXMP2Q9NR77 195 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
VPS33B-202ENST00000535906 PSD3Q9NYI0 1048 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 ZNF112Q9UJU3 913 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 ZNF541Q9H0D2 1346 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 LTBP3Q9NS15 1303 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 TMEM150BA6NC51 233 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 PRLRP16471 622 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 UGCGQ16739 394 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 MAP9Q49MG5 647 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 ANGEL2Q5VTE6 544 aaKnown RBP14.62□□□□□ -0.07
VPS33B-202ENST00000535906 DCAF15Q66K64 600 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 TRMT1LQ7Z2T5 733 aaKnown RBP14.62□□□□□ -0.07
VPS33B-202ENST00000535906 ZNF571Q7Z3V5 609 aaPredicted RBP14.62□□□□□ -0.07
VPS33B-202ENST00000535906 RNF10Q8N5U6 811 aaKnown RBP14.62□□□□□ -0.07
VPS33B-202ENST00000535906 SAMD3Q8N6K7 520 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 ZNF280CQ8ND82 737 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 NOX5Q96PH1 765 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 MKNK1Q9BUB5 465 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 PACSIN1Q9BY11 444 aa14.62□□□□□ -0.07
VPS33B-202ENST00000535906 ACBD3Q9H3P7 528 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms