RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 ADAM2Q99965 735 aa14.22□□□□□ -0.13
USF1-211ENST00000534633 ZNF577Q9BSK1 485 aa14.22□□□□□ -0.13
USF1-211ENST00000534633 ZMYND12Q9H0C1 365 aa14.22□□□□□ -0.13
USF1-211ENST00000534633 NAP1L2Q9ULW6 460 aaPredicted RBP14.22□□□□□ -0.13
USF1-211ENST00000534633 ST3GAL5Q9UNP4 418 aa14.22□□□□□ -0.13
USF1-211ENST00000534633 PCDHB12Q9Y5F1 795 aa14.22□□□□□ -0.13
USF1-211ENST00000534633 NID2Q14112 1375 aa14.22□□□□□ -0.13
USF1-211ENST00000534633 DENND3A2RUS2 1198 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 MGEA5O60502 916 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 C22orf31O95567 290 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 ATP4AP20648 1035 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 METAP2P50579 478 aaKnown RBP eCLIP14.21□□□□□ -0.13
USF1-211ENST00000534633 NEK4P51957 841 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 CRYBB1P53674 252 aaPredicted RBP14.21□□□□□ -0.13
USF1-211ENST00000534633 AK2P54819 239 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 COASYQ13057 564 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 NTRK3Q16288 839 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 CKAP2LQ8IYA6 745 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 REXO1Q8N1G1 1221 aaKnown RBP14.21□□□□□ -0.13
USF1-211ENST00000534633 CDHR5Q9HBB8 845 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 C6orf50Q9HD87 102 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 AAASQ9NRG9 546 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 TCEAL9Q9UHQ7 104 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 TPCN1Q9ULQ1 816 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 CEP131Q9UPN4 1083 aa14.21□□□□□ -0.13
USF1-211ENST00000534633 MAFBQ9Y5Q3 323 aaPredicted RBP14.21□□□□□ -0.13
USF1-211ENST00000534633 FSD2A1L4K1 749 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 C9IYK1 514 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 PSAPP07602 524 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 GNA11P29992 359 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 NRIP1P48552 1158 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 KIZQ2M2Z5 673 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 HERC4Q5GLZ8 1057 aaPredicted RBP14.2□□□□□ -0.14
USF1-211ENST00000534633 SPOUT1Q5T280 376 aaKnown RBP14.2□□□□□ -0.14
USF1-211ENST00000534633 SMRP1Q8NCR6 262 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 ZNF274Q96GC6 653 aaPredicted RBP14.2□□□□□ -0.14
USF1-211ENST00000534633 TBC1D32Q96NH3 1257 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 KCNH6Q9H252 994 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 ELAC1Q9H777 363 aaKnown RBP14.2□□□□□ -0.14
USF1-211ENST00000534633 NCOA5Q9HCD5 579 aaKnown RBP14.2□□□□□ -0.14
USF1-211ENST00000534633 CLEC1BQ9P126 229 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 PCDHA10Q9Y5I2 948 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 TECTAO75443 2155 aa14.2□□□□□ -0.14
USF1-211ENST00000534633 PIEZO1Q92508 2521 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 TBKBP1A7MCY6 615 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 PRPF3O43395 683 aaKnown RBP14.19□□□□□ -0.14
USF1-211ENST00000534633 IBSPP21815 317 aaPredicted RBP14.19□□□□□ -0.14
USF1-211ENST00000534633 CCT2P78371 535 aaKnown RBP14.19□□□□□ -0.14
USF1-211ENST00000534633 FAM189BP81408 668 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 PKN1Q16512 942 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 FAM102BQ5T8I3 360 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 PDE12Q6L8Q7 609 aaKnown RBP14.19□□□□□ -0.14
USF1-211ENST00000534633 FAM228AQ86W67 206 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 RNF135Q8IUD6 432 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 ZNF710Q8N1W2 664 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 METTL13Q8N6R0 699 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 FAM167AQ96KS9 214 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 OSMRQ99650 979 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 TLE6Q9H808 572 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 ATP6V0A4Q9HBG4 840 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 TLR9Q9NR96 1032 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 TMEM161AQ9NX61 479 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 MUTYHQ9UIF7 546 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 WDFY4Q6ZS81 3184 aa14.19□□□□□ -0.14
USF1-211ENST00000534633 ADAMTS3O15072 1205 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 MAGEB2O15479 319 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 PPFIA3O75145 1194 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 GPR32O75388 356 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 FGF18O76093 207 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 LARGE1O95461 756 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 GLP2RO95838 553 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 VTNP04004 478 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 CIITAP33076 1130 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 DSC3Q14574 896 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 PRR16Q569H4 304 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 RBM23Q86U06 439 aaKnown RBP14.18□□□□□ -0.14
USF1-211ENST00000534633 COLGALT1Q8NBJ5 622 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 CCDC148Q8NFR7 591 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 BICD2Q8TD16 824 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 MICAL1Q8TDZ2 1067 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 TYW1Q9NV66 732 aaKnown RBP14.18□□□□□ -0.14
USF1-211ENST00000534633 GABBR1Q9UBS5 961 aa14.18□□□□□ -0.14
USF1-211ENST00000534633 BARX2Q9UMQ3 279 aaPredicted RBP14.18□□□□□ -0.14
USF1-211ENST00000534633 WDR64B1ANS9 1081 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 HOXA2O43364 376 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 DTNBO60941 627 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 LAG3P18627 525 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 TMOD1P28289 359 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 AKAP17AQ02040 695 aaKnown RBP14.17□□□□□ -0.14
USF1-211ENST00000534633 SCRN1Q12765 414 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 STK3Q13188 491 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 ME3Q16798 604 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 HFE2Q6ZVN8 426 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 TRMT1LQ7Z2T5 733 aaKnown RBP14.17□□□□□ -0.14
USF1-211ENST00000534633 THNSL1Q8IYQ7 743 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 LINC01465Q8N7H1 131 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 LENG9Q96B70 501 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 MAP7D2Q96T17 732 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 PPP1R16BQ96T49 567 aa14.17□□□□□ -0.14
USF1-211ENST00000534633 CDCA3Q99618 268 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms