RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, human

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA2-205	ENST00000533776	CACTIN	Q8WUQ7	758 aa	Known RBP	4.62	□□□□□ -1.67
BRCA2-205	ENST00000533776	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.62	□□□□□ -1.67
BRCA2-205	ENST00000533776	TRIM8	Q9BZR9	551 aa		4.62	□□□□□ -1.67
BRCA2-205	ENST00000533776	NELFA	Q9H3P2	528 aa		4.62	□□□□□ -1.67
BRCA2-205	ENST00000533776	MSL2	Q9HCI7	577 aa		4.62	□□□□□ -1.67
BRCA2-205	ENST00000533776	SNTG2	Q9NY99	539 aa		4.62	□□□□□ -1.67
BRCA2-205	ENST00000533776	ASB1	Q9Y576	335 aa		4.62	□□□□□ -1.67
BRCA2-205	ENST00000533776	B3GALT1	Q9Y5Z6	326 aa		4.62	□□□□□ -1.67
BRCA2-205	ENST00000533776		E9PSI1	815 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	GOLGA6L22	H0YM25	854 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	APEX1	P27695	318 aa	Known RBP	4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	SDHA	P31040	664 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	STAT3	P40763	770 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	IRF9	Q00978	393 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	HHEX	Q03014	270 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	HGFAC	Q04756	655 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	SERINC3	Q13530	473 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	RIN1	Q13671	783 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	CATSPERE	Q5SY80	951 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	BRAP	Q7Z569	592 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	CALML6	Q8TD86	181 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	NEU4	Q8WWR8	484 aa	Predicted RBP	4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	DLG3	Q92796	817 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	CHFR	Q96EP1	664 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	SCLY	Q96I15	445 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	HIRIP3	Q9BW71	556 aa	Predicted RBP	4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	AGO3	Q9H9G7	860 aa	Known RBP	4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	MAGEL2	Q9UJ55	1249 aa		4.61	□□□□□ -1.67
BRCA2-205	ENST00000533776	KRT37	O76014	449 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	MAP3K12	Q12852	859 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	TUBA3C	Q13748	450 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	ACAP1	Q15027	740 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	TMEM177	Q53S58	311 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	TRIM61	Q5EBN2	209 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	ZC3H12B	Q5HYM0	836 aa	Known RBP	4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	TUBA3E	Q6PEY2	450 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	FGD2	Q7Z6J4	655 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	BCL6B	Q8N143	479 aa	Predicted RBP	4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	C2orf69	Q8N8R5	385 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	IGSF22	Q8N9C0	903 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	DNAJC7	Q99615	494 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	MMRN2	Q9H8L6	949 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	HECA	Q9UBI9	543 aa	Predicted RBP	4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776	GIT1	Q9Y2X7	761 aa		4.6	□□□□□ -1.67
BRCA2-205	ENST00000533776		A0A1W2PRX2	142 aa		4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	TCRBV16S1A1N1	A0A5B0	115 aa		4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	ADH4	P08319	380 aa		4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	ATP2C1	P98194	919 aa	Predicted RBP	4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	ALDH6A1	Q02252	535 aa	Known RBP	4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	CRHR2	Q13324	411 aa		4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	KRTAP5-11	Q6L8G4	156 aa		4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	ABHD17C	Q6PCB6	329 aa		4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	ADGRE4P	Q86SQ3	457 aa		4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	ZNF483	Q8TF39	744 aa	Predicted RBP	4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	SRPK1	Q96SB4	655 aa	Known RBP	4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	WDR33	Q9C0J8	1336 aa	Known RBP	4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	IKZF4	Q9H2S9	585 aa		4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	C11orf21	Q9P2W6	132 aa		4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	REXO2	Q9Y3B8	237 aa	Known RBP	4.59	□□□□□ -1.67
BRCA2-205	ENST00000533776	KCNA6	P17658	529 aa		4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	ATXN1	P54253	815 aa	Known RBP	4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	FNDC7	Q5VTL7	733 aa		4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	KLHDC10	Q6PID8	442 aa		4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	AMER2	Q8N7J2	671 aa		4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	ZSWIM2	Q8NEG5	633 aa		4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	CEP89	Q96ST8	783 aa		4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	BOC	Q9BWV1	1114 aa		4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	MRPL4	Q9BYD3	311 aa	Known RBP	4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.58	□□□□□ -1.68
BRCA2-205	ENST00000533776	PMS2P1	A4D2B8	440 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	CYP27B1	O15528	508 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	MAF	O75444	373 aa	Predicted RBP	4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	ZBTB48	P10074	688 aa	Predicted RBP	4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	RGS3	P49796	1198 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	KIF11	P52732	1056 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	DPT	Q07507	201 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	RRP1B	Q14684	758 aa	Known RBP	4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	LRP10	Q7Z4F1	713 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	TMPRSS6	Q8IU80	811 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	THEMIS	Q8N1K5	641 aa	Predicted RBP	4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	RABGGTA	Q92696	567 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	RPL10L	Q96L21	214 aa	Known RBP	4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	FOXB1	Q99853	325 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	TRIM39	Q9HCM9	518 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	CEP72	Q9P209	647 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	SAE1	Q9UBE0	346 aa	Predicted RBP	4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	VWA7	Q9Y334	891 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	SH3BP1	Q9Y3L3	701 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	RBM8A	Q9Y5S9	174 aa	Known RBP	4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776	PTCH2	Q9Y6C5	1203 aa		4.57	□□□□□ -1.68
BRCA2-205	ENST00000533776		A0A087X1B8	175 aa		4.56	□□□□□ -1.68
BRCA2-205	ENST00000533776	KRTAP23-1	A1A580	65 aa		4.56	□□□□□ -1.68
BRCA2-205	ENST00000533776		M0R2C6	588 aa		4.56	□□□□□ -1.68

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