RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 EMILIN3Q9NT22 766 aa19.63■□□□□ 0.73
UBXN1-213ENST00000532904 FRMD3A2A2Y4 597 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 SRRM3A6NNA2 597 aaPredicted RBP19.62■□□□□ 0.73
UBXN1-213ENST00000532904 BHMG1C9JSJ3 638 aaPredicted RBP19.62■□□□□ 0.73
UBXN1-213ENST00000532904 TBX3O15119 743 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 KIF4AO95239 1232 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 CYP11B2P19099 503 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 EPS15P42566 896 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 KCNH2Q12809 1159 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 HERC4Q5GLZ8 1057 aaPredicted RBP19.62■□□□□ 0.73
UBXN1-213ENST00000532904 DPY19L2P1Q6NXN4 242 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 IRF2BP2Q7Z5L9 587 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 FAM160B2Q86V87 743 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 GPBP1Q86WP2 473 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 SLFN12Q8IYM2 578 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 SCFD2Q8WU76 684 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 PLCB1Q9NQ66 1216 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 KIAA1024Q9UPX6 916 aa19.62■□□□□ 0.73
UBXN1-213ENST00000532904 NPHP3-ACAD11A0A0J9YXS1 232 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 CETN3O15182 167 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 PPP1R37O75864 691 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 SREBF1P36956 1147 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 RNASE9P60153 205 aaKnown RBP19.61■□□□□ 0.73
UBXN1-213ENST00000532904 GUCY1A3Q02108 690 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 PTGISQ16647 500 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 KIAA1755Q5JYT7 1200 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 KLHL7Q8IXQ5 586 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 SPICE1Q8N0Z3 855 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 ACTRT1Q8TDG2 376 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 PLAAQ9Y263 795 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 BZW2Q9Y6E2 419 aaKnown RBP19.61■□□□□ 0.73
UBXN1-213ENST00000532904 KCNK3O14649 394 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 GUCY2CP25092 1073 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 MDH1P40925 334 aaKnown RBP19.61■□□□□ 0.73
UBXN1-213ENST00000532904 ERVK-9P63128 1117 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 ARHGAP4P98171 946 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 PTK2Q05397 1052 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 ITGB3BPQ13352 177 aaPredicted RBP19.61■□□□□ 0.73
UBXN1-213ENST00000532904 CUL1Q13616 776 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 ENOX2Q16206 610 aaKnown RBP19.61■□□□□ 0.73
UBXN1-213ENST00000532904 IFI16Q16666 785 aaKnown RBP19.61■□□□□ 0.73
UBXN1-213ENST00000532904 Q4G0T1 1027 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 CDAN1Q8IWY9 1227 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 RANBP17Q9H2T7 1088 aaKnown RBP19.61■□□□□ 0.73
UBXN1-213ENST00000532904 TMBIM4Q9HC24 238 aa19.61■□□□□ 0.73
UBXN1-213ENST00000532904 SPDYE3A6NKU9 549 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 OPLAHO14841 1288 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 ECHS1P30084 290 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 CIITAP33076 1130 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 NAA35Q5VZE5 725 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 MIGA2Q7L4E1 593 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 ZNF571Q7Z3V5 609 aaPredicted RBP19.6■□□□□ 0.73
UBXN1-213ENST00000532904 LRRC57Q8N9N7 239 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 CALR3Q96L12 384 aaKnown RBP19.6■□□□□ 0.73
UBXN1-213ENST00000532904 ATP8B3O60423 1300 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 PITPNM2Q9BZ72 1349 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 POTEB3A0JP26 581 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 POTECB2RU33 542 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 MEFVO15553 781 aaPredicted RBP19.6■□□□□ 0.73
UBXN1-213ENST00000532904 KIAA0754O94854 1291 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 CYP3A4P08684 503 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 SNAP25P60880 206 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 CACNB1Q02641 598 aaPredicted RBP19.6■□□□□ 0.73
UBXN1-213ENST00000532904 RASA3Q14644 834 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 USH1GQ495M9 461 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 POTEBQ6S5H4 581 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 MICALCLQ6ZW33 695 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 FRMD5Q7Z6J6 570 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 YTHDF3Q7Z739 585 aaKnown RBP19.6■□□□□ 0.73
UBXN1-213ENST00000532904 ZNF473Q8WTR7 871 aaKnown RBP19.6■□□□□ 0.73
UBXN1-213ENST00000532904 FEM1BQ9UK73 627 aa19.6■□□□□ 0.73
UBXN1-213ENST00000532904 PHF20L1A8MW92 1017 aa19.59■□□□□ 0.73
UBXN1-213ENST00000532904 FZD9O00144 591 aa19.59■□□□□ 0.73
UBXN1-213ENST00000532904 ZBTB48P10074 688 aaPredicted RBP19.59■□□□□ 0.73
UBXN1-213ENST00000532904 ACTN1P12814 892 aa19.59■□□□□ 0.73
UBXN1-213ENST00000532904 CEP85LQ5SZL2 805 aa19.59■□□□□ 0.73
UBXN1-213ENST00000532904 MAATS1Q7Z4T9 603 aa19.59■□□□□ 0.73
UBXN1-213ENST00000532904 CNPY4Q8N129 248 aa19.59■□□□□ 0.73
UBXN1-213ENST00000532904 TEPSINQ96N21 525 aa19.59■□□□□ 0.73
UBXN1-213ENST00000532904 SMCHD1A6NHR9 2005 aa19.59■□□□□ 0.73
UBXN1-213ENST00000532904 FSBPO95073 299 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 NR2F2P24468 414 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 ANXA13P27216 316 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 PRKCIP41743 596 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 SLC12A3P55017 1021 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 ARSHQ5FYA8 562 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 OTUD6BQ8N6M0 293 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 P2RX7Q99572 595 aaKnown RBP19.58■□□□□ 0.73
UBXN1-213ENST00000532904 GGA2Q9UJY4 613 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 NAGPAQ9UK23 515 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 NENFQ9UMX5 172 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 TRAF3IP3Q9Y228 551 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 BCS1LQ9Y276 419 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 STK24Q9Y6E0 443 aa19.58■□□□□ 0.73
UBXN1-213ENST00000532904 H0YGN5 161 aa19.58■□□□□ 0.72
UBXN1-213ENST00000532904 UCHL3P15374 230 aa19.58■□□□□ 0.72
UBXN1-213ENST00000532904 SLC9A1P19634 815 aa19.58■□□□□ 0.72
UBXN1-213ENST00000532904 HSD17B3P37058 310 aa19.58■□□□□ 0.72
UBXN1-213ENST00000532904 FNTAP49354 379 aa19.58■□□□□ 0.72
UBXN1-213ENST00000532904 HLTFQ14527 1009 aaKnown RBP eCLIP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms