RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 IL11P20809 199 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 PDCP20941 246 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 HTR1BP28222 390 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 ADH7P40394 386 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 POLR2FP61218 127 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 IL1RL1Q01638 556 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 PPARDQ03181 441 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 TLE2Q04725 743 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 MPEG1Q2M385 716 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 WSCD2Q2TBF2 565 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 GPR139Q6DWJ6 353 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 NUP93Q8N1F7 819 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 GABPB2Q8TAK5 448 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 HERVK_113Q902F9 699 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 FGD4Q96M96 766 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 PIGSQ96S52 555 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 ZSCAN10Q96SZ4 725 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 PYM1Q9BRP8 204 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 KCTD10Q9H3F6 313 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 C11orf16Q9NQ32 467 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 TLR7Q9NYK1 1049 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 SH3BGRL2Q9UJC5 107 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 DUSP12Q9UNI6 340 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 SRPK3Q9UPE1 567 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 TBCAO75347 108 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 DGKIO75912 1065 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 ALDH2P05091 517 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 SFTPCP11686 197 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 MYF5P13349 255 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 HDCP19113 662 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 RNASE9P60153 205 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 PIP4K2BP78356 416 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 PPP1R26Q5T8A7 1209 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 TDRD10Q5VZ19 366 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 TMEM214Q6NUQ4 689 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 GALNT7Q86SF2 657 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 SULF2Q8IWU5 870 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 CCDC170Q8IYT3 715 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 TBC1D21Q8IYX1 336 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 OR8H3Q8N146 312 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 LRRC71Q8N4P6 559 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 TSPYL6Q8N831 410 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 KIF1BPQ96EK5 621 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 EYA3Q99504 573 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 AGXT2Q9BYV1 514 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 KIF17Q9P2E2 1029 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 SUN2Q9UH99 717 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 FLT1P17948 1338 aa5.85□□□□□ -1.47
ECHDC1-222ENST00000531967 PORP16435 677 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 CASP6P55212 293 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 GUCY1A3Q02108 690 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 ALDH6A1Q02252 535 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 MAPK7Q13164 816 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 ADAM15Q13444 863 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 TRPC3Q13507 836 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 SF1Q15637 639 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 PGS1Q32NB8 556 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 MUM1L1Q5H9M0 696 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 NUP54Q7Z3B4 507 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 PRR18Q8N4B5 295 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 TCP11L2Q8N4U5 519 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 ZNF540Q8NDQ6 660 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 BVESQ8NE79 360 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 OR13H1Q8NG92 308 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 UHMK1Q8TAS1 419 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 BRSK1Q8TDC3 778 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 SYAP1Q96A49 352 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 ZNF845Q96IR2 970 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 KLHL25Q9H0H3 589 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 OR10A4Q9H209 315 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 SUDS3Q9H7L9 328 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 CCDC177Q9NQR7 707 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 ADD3Q9UEY8 706 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 PCSK1NQ9UHG2 260 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 FAM184BQ9ULE4 1060 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 PCDHA11Q9Y5I1 949 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 GPC6Q9Y625 555 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 NDC80O14777 642 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 ALOX15P16050 662 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 NLRP12P59046 1061 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 GPR85P60893 370 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 IFI35P80217 286 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 DMTNQ08495 405 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 ODF2Q5BJF6 829 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 B4GALNT4Q76KP1 1039 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 CEP68Q76N32 757 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 ITFG2Q969R8 447 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 MRGPRX3Q96LB0 322 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 FSD1Q9BTV5 496 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 EDEM3Q9BZQ6 932 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 BHLHE41Q9C0J9 482 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 NOL6Q9H6R4 1146 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 RASAL2Q9UJF2 1139 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 TLL2Q9Y6L7 1015 aa5.84□□□□□ -1.47
ECHDC1-222ENST00000531967 GFRA2O00451 464 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 TGM5O43548 720 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 TSPAN3O60637 253 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 COQ9O75208 318 aa5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 EEF2P13639 858 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-222ENST00000531967 SELPP16109 830 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms