RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	ZNF579	Q8NAF0	562 aa	Known RBP	28.85	■■■□□ 2.21
PICALM-215	ENST00000531558	USP38	Q8NB14	1042 aa		28.85	■■■□□ 2.21
PICALM-215	ENST00000531558	PPP1R16B	Q96T49	567 aa		28.85	■■■□□ 2.21
PICALM-215	ENST00000531558	JPH2	Q9BR39	696 aa	Predicted RBP	28.85	■■■□□ 2.21
PICALM-215	ENST00000531558	RAB34	Q9BZG1	259 aa		28.85	■■■□□ 2.21
PICALM-215	ENST00000531558	AGO3	Q9H9G7	860 aa	Known RBP	28.85	■■■□□ 2.21
PICALM-215	ENST00000531558	GPR32	O75388	356 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	MED24	O75448	989 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	RFC5	P40937	340 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	PDIA5	Q14554	519 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	IL17A	Q16552	155 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	KIZ	Q2M2Z5	673 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	XKR9	Q5GH70	373 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	HAUS3	Q68CZ6	603 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	CATSPER3	Q86XQ3	398 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	ZNF710	Q8N1W2	664 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	PBX4	Q9BYU1	374 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	CDHR5	Q9HBB8	845 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	ANKEF1	Q9NU02	776 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	LRWD1	Q9UFC0	647 aa		28.84	■■■□□ 2.21
PICALM-215	ENST00000531558	EVPL	Q92817	2033 aa		28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	DNAJB2	P25686	324 aa		28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	RPA1	P27694	616 aa		28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	CD52	P31358	61 aa		28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	PBX2	P40425	430 aa		28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	CRYBB1	P53674	252 aa	Predicted RBP	28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	DEFB103A	P81534	67 aa		28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	DRP2	Q13474	957 aa		28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	DTHD1	Q6ZMT9	781 aa		28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	EXOC8	Q8IYI6	725 aa		28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	SLC7A3	Q8WY07	619 aa		28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	DHX33	Q9H6R0	707 aa	Known RBP	28.83	■■■□□ 2.21
PICALM-215	ENST00000531558	DNM2	P50570	870 aa		28.82	■■■□□ 2.2
PICALM-215	ENST00000531558	POLG	P54098	1239 aa	Predicted RBP	28.82	■■■□□ 2.2
PICALM-215	ENST00000531558	NLRP11	P59045	1033 aa	Known RBP	28.82	■■■□□ 2.2
PICALM-215	ENST00000531558	RAB30	Q15771	203 aa		28.82	■■■□□ 2.2
PICALM-215	ENST00000531558	HERC6	Q8IVU3	1022 aa		28.82	■■■□□ 2.2
PICALM-215	ENST00000531558	TMEM40	Q8WWA1	233 aa		28.82	■■■□□ 2.2
PICALM-215	ENST00000531558	OSMR	Q99650	979 aa		28.82	■■■□□ 2.2
PICALM-215	ENST00000531558	ADAMTS10	Q9H324	1103 aa		28.82	■■■□□ 2.2
PICALM-215	ENST00000531558	BMP15	O95972	392 aa		28.81	■■■□□ 2.2
PICALM-215	ENST00000531558	PAK2	Q13177	524 aa		28.81	■■■□□ 2.2
PICALM-215	ENST00000531558	ARL6IP4	Q66PJ3	421 aa	Known RBP	28.81	■■■□□ 2.2
PICALM-215	ENST00000531558	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	28.81	■■■□□ 2.2	2e-7	■■■□□ 18.3
PICALM-215	ENST00000531558	PIGO	Q8TEQ8	1089 aa		28.81	■■■□□ 2.2
PICALM-215	ENST00000531558	PADI3	Q9ULW8	664 aa		28.81	■■■□□ 2.2
PICALM-215	ENST00000531558	STK24	Q9Y6E0	443 aa		28.81	■■■□□ 2.2
PICALM-215	ENST00000531558	XRCC6	P12956	609 aa	Known RBP eCLIP	28.8	■■■□□ 2.2
PICALM-215	ENST00000531558	MUT	P22033	750 aa		28.8	■■■□□ 2.2
PICALM-215	ENST00000531558	CCT6A	P40227	531 aa	Known RBP	28.8	■■■□□ 2.2
PICALM-215	ENST00000531558	GPC3	P51654	580 aa		28.8	■■■□□ 2.2
PICALM-215	ENST00000531558	RABGGTB	P53611	331 aa		28.8	■■■□□ 2.2
PICALM-215	ENST00000531558	EMC2	Q15006	297 aa		28.8	■■■□□ 2.2
PICALM-215	ENST00000531558	POTEG	Q6S5H5	508 aa		28.8	■■■□□ 2.2
PICALM-215	ENST00000531558	CCDC43	Q96MW1	224 aa	Known RBP	28.8	■■■□□ 2.2
PICALM-215	ENST00000531558	SUCLA2	Q9P2R7	463 aa	Predicted RBP	28.8	■■■□□ 2.2
PICALM-215	ENST00000531558	MSRA	Q9UJ68	235 aa		28.8	■■■□□ 2.2
PICALM-215	ENST00000531558	NOC2L	Q9Y3T9	749 aa	Known RBP	28.8	■■■□□ 2.2
PICALM-215	ENST00000531558	RPS6KA5	O75582	802 aa		28.79	■■■□□ 2.2
PICALM-215	ENST00000531558	AMH	P03971	560 aa		28.79	■■■□□ 2.2
PICALM-215	ENST00000531558	RARRES1	P49788	294 aa		28.79	■■■□□ 2.2
PICALM-215	ENST00000531558	SNX29	Q8TEQ0	813 aa		28.79	■■■□□ 2.2
PICALM-215	ENST00000531558	TIFA	Q96CG3	184 aa		28.79	■■■□□ 2.2
PICALM-215	ENST00000531558	NACC1	Q96RE7	527 aa		28.79	■■■□□ 2.2
PICALM-215	ENST00000531558	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	28.79	■■■□□ 2.2
PICALM-215	ENST00000531558	BMP2K	Q9NSY1	1161 aa	Predicted RBP	28.79	■■■□□ 2.2
PICALM-215	ENST00000531558	YBX2	Q9Y2T7	364 aa	Known RBP	28.79	■■■□□ 2.2
PICALM-215	ENST00000531558	PCDHA11	Q9Y5I1	949 aa		28.79	■■■□□ 2.2
PICALM-215	ENST00000531558	MICAL3	Q7RTP6	2002 aa		28.79	■■■□□ 2.2
PICALM-215	ENST00000531558	TMEM265	A0A087WTH1	108 aa		28.78	■■■□□ 2.2
PICALM-215	ENST00000531558		A0A087WWV3	80 aa		28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	PP2D1	A8MPX8	630 aa		28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	GAS2	O43903	313 aa	Known RBP	28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	CDC42EP1	Q00587	391 aa		28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	SF3A1	Q15459	793 aa	Known RBP	28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	ZNF697	Q5TEC3	545 aa		28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	TMCO2	Q7Z6W1	182 aa	Predicted RBP	28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	MYOCD	Q8IZQ8	938 aa		28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	SPRYD3	Q8NCJ5	442 aa		28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	ZNF668	Q96K58	619 aa	Predicted RBP	28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	SCLT1	Q96NL6	688 aa		28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	ERVK-5	Q9HDB9	667 aa		28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	DBR1	Q9UK59	544 aa	Known RBP	28.78	■■■□□ 2.2
PICALM-215	ENST00000531558	VWA3A	A6NCI4	1184 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558	KRT79	Q5XKE5	535 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558	FAM173B	Q6P4H8	233 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558		Q7L0L9	218 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558	FAM228A	Q86W67	206 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558	DEFB123	Q8N688	67 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558	NLRP7	Q8WX94	980 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558	TMEM143	Q96AN5	459 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558	MTR	Q99707	1265 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558	FTHL17	Q9BXU8	183 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558	XPNPEP1	Q9NQW7	623 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558	ARID2	Q68CP9	1835 aa		28.77	■■■□□ 2.2
PICALM-215	ENST00000531558	CHD9	Q3L8U1	2897 aa		28.76	■■■□□ 2.2
PICALM-215	ENST00000531558	DGAT1	O75907	488 aa		28.76	■■■□□ 2.19
PICALM-215	ENST00000531558	GJB5	O95377	273 aa		28.76	■■■□□ 2.19
PICALM-215	ENST00000531558	PDIA4	P13667	645 aa	Known RBP	28.76	■■■□□ 2.19

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