RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 GBP4Q96PP9 640 aa7.21□□□□□ -1.26
PTPRK-220ENST00000531466 PRRX2Q99811 253 aa7.21□□□□□ -1.26
PTPRK-220ENST00000531466 TRIM55Q9BYV6 548 aa7.21□□□□□ -1.26
PTPRK-220ENST00000531466 PFDN2Q9UHV9 154 aa7.21□□□□□ -1.26
PTPRK-220ENST00000531466 RPS6KA4O75676 772 aa7.2□□□□□ -1.26
PTPRK-220ENST00000531466 CRTAMO95727 393 aa7.2□□□□□ -1.26
PTPRK-220ENST00000531466 LACTBP83111 547 aaPredicted RBP7.2□□□□□ -1.26
PTPRK-220ENST00000531466 ATP2C1P98194 919 aaPredicted RBP7.2□□□□□ -1.26
PTPRK-220ENST00000531466 FSTL1Q12841 308 aa7.2□□□□□ -1.26
PTPRK-220ENST00000531466 NOSTRINQ8IVI9 506 aa7.2□□□□□ -1.26
PTPRK-220ENST00000531466 ULK2Q8IYT8 1036 aa7.2□□□□□ -1.26
PTPRK-220ENST00000531466 MPHOSPH9Q99550 1183 aa7.2□□□□□ -1.26
PTPRK-220ENST00000531466 RASSF10A6NK89 507 aa7.19□□□□□ -1.26
PTPRK-220ENST00000531466 FOXP2O15409 715 aa7.19□□□□□ -1.26
PTPRK-220ENST00000531466 NAT1P18440 290 aa7.19□□□□□ -1.26
PTPRK-220ENST00000531466 DPY19L2P1Q6NXN4 242 aa7.19□□□□□ -1.26
PTPRK-220ENST00000531466 ANKRD35Q8N283 1001 aa7.19□□□□□ -1.26
PTPRK-220ENST00000531466 RABGGTAQ92696 567 aa7.19□□□□□ -1.26
PTPRK-220ENST00000531466 IPO9Q96P70 1041 aaKnown RBP7.19□□□□□ -1.26
PTPRK-220ENST00000531466 KCNH7Q9NS40 1196 aa7.19□□□□□ -1.26
PTPRK-220ENST00000531466 CTDP1Q9Y5B0 961 aaPredicted RBP7.19□□□□□ -1.26
PTPRK-220ENST00000531466 FOXN1O15353 648 aa7.18□□□□□ -1.26
PTPRK-220ENST00000531466 PEX11BO96011 259 aa7.18□□□□□ -1.26
PTPRK-220ENST00000531466 SSRP1Q08945 709 aaKnown RBP7.18□□□□□ -1.26
PTPRK-220ENST00000531466 CNGB1Q14028 1251 aaPredicted RBP7.18□□□□□ -1.26
PTPRK-220ENST00000531466 RPUSD2Q8IZ73 545 aaKnown RBP7.18□□□□□ -1.26
PTPRK-220ENST00000531466 BCL6BQ8N143 479 aaPredicted RBP7.18□□□□□ -1.26
PTPRK-220ENST00000531466 GPRC5BQ9NZH0 403 aa7.18□□□□□ -1.26
PTPRK-220ENST00000531466 APEX1P27695 318 aaKnown RBP7.17□□□□□ -1.26
PTPRK-220ENST00000531466 GABREP78334 506 aa7.17□□□□□ -1.26
PTPRK-220ENST00000531466 MTERF2Q49AM1 385 aa7.17□□□□□ -1.26
PTPRK-220ENST00000531466 LAIR1Q6GTX8 287 aa7.17□□□□□ -1.26
PTPRK-220ENST00000531466 ZBTB38Q8NAP3 1195 aaPredicted RBP7.17□□□□□ -1.26
PTPRK-220ENST00000531466 ERCC4Q92889 916 aaPredicted RBP7.17□□□□□ -1.26
PTPRK-220ENST00000531466 EXOC2Q96KP1 924 aa7.17□□□□□ -1.26
PTPRK-220ENST00000531466 GMLQ99445 158 aa7.17□□□□□ -1.26
PTPRK-220ENST00000531466 MAGEL2Q9UJ55 1249 aa7.17□□□□□ -1.26
PTPRK-220ENST00000531466 COQ6Q9Y2Z9 468 aa7.17□□□□□ -1.26
PTPRK-220ENST00000531466 TNFRSF18Q9Y5U5 241 aa7.17□□□□□ -1.26
PTPRK-220ENST00000531466 PDPK1O15530 556 aa7.16□□□□□ -1.26
PTPRK-220ENST00000531466 DIAPH1O60610 1272 aaKnown RBP7.16□□□□□ -1.26
PTPRK-220ENST00000531466 BMP5P22003 454 aa7.16□□□□□ -1.26
PTPRK-220ENST00000531466 ADCY7P51828 1080 aa7.16□□□□□ -1.26
PTPRK-220ENST00000531466 COL10A1Q03692 680 aa7.16□□□□□ -1.26
PTPRK-220ENST00000531466 TMEM132BQ14DG7 1078 aa7.16□□□□□ -1.26
PTPRK-220ENST00000531466 MIEF2Q96C03 454 aa7.16□□□□□ -1.26
PTPRK-220ENST00000531466 RPL10LQ96L21 214 aaKnown RBP7.16□□□□□ -1.26
PTPRK-220ENST00000531466 NRDE2Q9H7Z3 1164 aa7.16□□□□□ -1.26
PTPRK-220ENST00000531466 ASB1Q9Y576 335 aa7.16□□□□□ -1.26
PTPRK-220ENST00000531466 CCDC85CA6NKD9 419 aa7.15□□□□□ -1.26
PTPRK-220ENST00000531466 MAN2A2P49641 1150 aa7.15□□□□□ -1.26
PTPRK-220ENST00000531466 MAP3K12Q12852 859 aa7.15□□□□□ -1.26
PTPRK-220ENST00000531466 GAREM2Q75VX8 874 aa7.15□□□□□ -1.26
PTPRK-220ENST00000531466 SLC43A3Q8NBI5 491 aa7.15□□□□□ -1.26
PTPRK-220ENST00000531466 CALML6Q8TD86 181 aa7.15□□□□□ -1.26
PTPRK-220ENST00000531466 VWA7Q9Y334 891 aa7.15□□□□□ -1.26
PTPRK-220ENST00000531466 MSRB2Q9Y3D2 182 aa7.15□□□□□ -1.26
PTPRK-220ENST00000531466 RBM8AQ9Y5S9 174 aaKnown RBP7.15□□□□□ -1.26
PTPRK-220ENST00000531466 B3GALT1Q9Y5Z6 326 aa7.15□□□□□ -1.26
PTPRK-220ENST00000531466 TMEM191CA6NGB0 347 aa7.14□□□□□ -1.27
PTPRK-220ENST00000531466 GOLGA6L22H0YM25 854 aa7.14□□□□□ -1.27
PTPRK-220ENST00000531466 FAM20BO75063 409 aa7.14□□□□□ -1.27
PTPRK-220ENST00000531466 FAM153BP0C7A2 387 aa7.14□□□□□ -1.27
PTPRK-220ENST00000531466 ZC3H6P61129 1189 aaKnown RBP7.14□□□□□ -1.27
PTPRK-220ENST00000531466 TOB2Q14106 344 aaPredicted RBP7.14□□□□□ -1.27
PTPRK-220ENST00000531466 KLHDC10Q6PID8 442 aa7.14□□□□□ -1.27
PTPRK-220ENST00000531466 SLC7A6OSQ96CW6 309 aaPredicted RBP7.14□□□□□ -1.27
PTPRK-220ENST00000531466 GPHA2Q96T91 129 aa7.14□□□□□ -1.27
PTPRK-220ENST00000531466 BPIFB4P59827 614 aa7.13□□□□□ -1.27
PTPRK-220ENST00000531466 ELAVL1Q15717 326 aaKnown RBP7.13□□□□□ -1.27
PTPRK-220ENST00000531466 CATSPEREQ5SY80 951 aa7.13□□□□□ -1.27
PTPRK-220ENST00000531466 ZNF662Q6ZS27 426 aa7.13□□□□□ -1.27
PTPRK-220ENST00000531466 GSPT2Q8IYD1 628 aaKnown RBP7.13□□□□□ -1.27
PTPRK-220ENST00000531466 ANKRD53Q8N9V6 530 aa7.13□□□□□ -1.27
PTPRK-220ENST00000531466 DLG3Q92796 817 aa7.13□□□□□ -1.27
PTPRK-220ENST00000531466 GCDHQ92947 438 aaPredicted RBP7.13□□□□□ -1.27
PTPRK-220ENST00000531466 LPPQ93052 612 aa7.13□□□□□ -1.27
PTPRK-220ENST00000531466 DHRS4Q9BTZ2 278 aa7.13□□□□□ -1.27
PTPRK-220ENST00000531466 GPR87Q9BY21 358 aa7.13□□□□□ -1.27
PTPRK-220ENST00000531466 SLC6A15Q9H2J7 730 aa7.13□□□□□ -1.27
PTPRK-220ENST00000531466 SLC52A2Q9HAB3 445 aa7.13□□□□□ -1.27
PTPRK-220ENST00000531466 NDOR1Q9UHB4 597 aa7.13□□□□□ -1.27
PTPRK-220ENST00000531466 MRPS23Q9Y3D9 190 aaKnown RBP7.13□□□□□ -1.27
PTPRK-220ENST00000531466 C2orf78A6NCI8 922 aa7.12□□□□□ -1.27
PTPRK-220ENST00000531466 GOLGA8BA8MQT2 603 aa7.12□□□□□ -1.27
PTPRK-220ENST00000531466 H2AFYO75367 372 aaKnown RBP7.12□□□□□ -1.27
PTPRK-220ENST00000531466 MAFO75444 373 aaPredicted RBP7.12□□□□□ -1.27
PTPRK-220ENST00000531466 RASGRP1O95267 797 aa7.12□□□□□ -1.27
PTPRK-220ENST00000531466 SDHAP31040 664 aa7.12□□□□□ -1.27
PTPRK-220ENST00000531466 RASGRF1Q13972 1273 aa7.12□□□□□ -1.27
PTPRK-220ENST00000531466 FAM111BQ6SJ93 734 aa7.12□□□□□ -1.27
PTPRK-220ENST00000531466 SAE1Q9UBE0 346 aaPredicted RBP7.12□□□□□ -1.27
PTPRK-220ENST00000531466 PCSK5Q92824 1860 aa7.11□□□□□ -1.27
PTPRK-220ENST00000531466 UBE2QL1A1L167 161 aa7.11□□□□□ -1.27
PTPRK-220ENST00000531466 SESN2P58004 480 aaPredicted RBP7.11□□□□□ -1.27
PTPRK-220ENST00000531466 ALDH6A1Q02252 535 aaKnown RBP7.11□□□□□ -1.27
PTPRK-220ENST00000531466 TCIRG1Q13488 830 aa7.11□□□□□ -1.27
PTPRK-220ENST00000531466 MRGPREQ86SM8 312 aa7.11□□□□□ -1.27
PTPRK-220ENST00000531466 VOPP1Q96AW1 172 aa7.11□□□□□ -1.27
PTPRK-220ENST00000531466 PGBD4Q96DM1 585 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms