RNA–Protein interactions for RNA: ENST00000530903.1

RPUSD4-205, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-205ENST00000530903 SEPT4O43236 478 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 DKC1O60832 514 aaKnown RBP eCLIP11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 LGR5O75473 907 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 LETM1O95202 739 aaPredicted RBP11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 OATP04181 439 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 HSPA1AP0DMV8 641 aaKnown RBP11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 HSPA1BP0DMV9 641 aaKnown RBP11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 XRCC6P12956 609 aaKnown RBP eCLIP11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 ATP4AP20648 1035 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 MARK3P27448 753 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 GRK4P32298 578 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 NPEPPSP55786 919 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 ASIC1P78348 528 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 BEX3Q00994 111 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 AMPD3Q01432 767 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 RAD51AP2Q09MP3 1159 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 DPYDQ12882 1025 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 MAP3K21Q5TCX8 1036 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 ISM2Q6H9L7 571 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 ANO5Q75V66 913 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 DYMQ7RTS9 669 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 SYT2Q8N9I0 419 aaPredicted RBP11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 AFAP1L1Q8TED9 768 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 SH3TC2Q8TF17 1288 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 SMARCE1Q969G3 411 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 CCDC43Q96MW1 224 aaKnown RBP11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 RUSC1Q9BVN2 902 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 TRIM9Q9C026 710 aa11.12□□□□□ -0.63
RPUSD4-205ENST00000530903 FRMPD3Q5JV73 1810 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 STBD1O95210 358 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 SMC2O95347 1197 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 LGALS2P05162 132 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 KRT18P05783 430 aaKnown RBP11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 RARBP10826 455 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 CYP11B2P19099 503 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 LBX1P52954 281 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 DGKDQ16760 1214 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 MTERF2Q49AM1 385 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 ARSHQ5FYA8 562 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 XKR9Q5GH70 373 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 XKR3Q5GH77 459 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 OTUD6AQ7L8S5 288 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 KCTD17Q8N5Z5 321 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 DDX12PQ92771 950 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 NAP1L5Q96NT1 182 aaPredicted RBP11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 C7orf25Q9BPX7 421 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 PDCL3Q9H2J4 239 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 SMARCAD1Q9H4L7 1026 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 ANKEF1Q9NU02 776 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 DBR1Q9UK59 544 aaKnown RBP11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 PTPN22Q9Y2R2 807 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 Q9Y3F1 56 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 MYH11P35749 1972 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 SYNRGQ9UMZ2 1314 aa11.11□□□□□ -0.63
RPUSD4-205ENST00000530903 MYADML2A6NDP7 307 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 A6NJR5 290 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 USO1O60763 962 aaKnown RBP11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 PPFIA4O75335 1185 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 PGK1P00558 417 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 RPN1P04843 607 aaKnown RBP11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 MYL3P08590 195 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 C6orf222P0C671 652 aaPredicted RBP11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 HOXD8P13378 290 aaPredicted RBP11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 RARRES1P49788 294 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 CPT1AP50416 773 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 PLCB4Q15147 1175 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 FSCN1Q16658 493 aaKnown RBP11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 C6orf132Q5T0Z8 1188 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 RINT1Q6NUQ1 792 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 PADI6Q6TGC4 694 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 SASS6Q6UVJ0 657 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 PLPPR4Q7Z2D5 763 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 CEP170P1Q96L14 293 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 C16orf70Q9BSU1 422 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 LRRC27Q9C0I9 530 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 POLD4Q9HCU8 107 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 XPNPEP3Q9NQH7 507 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 TUBE1Q9UJT0 475 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 MAN1B1Q9UKM7 699 aa11.1□□□□□ -0.63
RPUSD4-205ENST00000530903 KLRC4O43908 158 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 MYCP01106 439 aaPredicted RBP11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 MYL1P05976 194 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 IDEP14735 1019 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 SARSP49591 514 aaKnown RBP11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 CTCFP49711 727 aaPredicted RBP11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 GJA9P57773 515 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 CHMP4BP1P59074 171 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 ZNF445P59923 1031 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 TYRO3Q06418 890 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 BRDTQ58F21 947 aaPredicted RBP11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 TRAF7Q6Q0C0 670 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 LRSAM1Q6UWE0 723 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 C1orf186Q6ZWK4 172 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 MAEAQ7L5Y9 396 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 SPATA20Q8TB22 786 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 DNAJC19Q96DA6 116 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 FAM167AQ96KS9 214 aa11.09□□□□□ -0.63
RPUSD4-205ENST00000530903 REEP2Q9BRK0 252 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms