RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 C3orf62Q6ZUJ4 267 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 DDX27Q96GQ7 796 aaKnown RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 SELENOSQ9BQE4 189 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 DHX36Q9H2U1 1008 aaKnown RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 NLRC4Q9NPP4 1024 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 TTC7AQ9ULT0 858 aaPredicted RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 AKR1B10O60218 316 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 CIAO1O76071 339 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 HARSP12081 509 aaKnown RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 SERPINB8P50452 374 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 YARSP54577 528 aaKnown RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 DRG2P55039 364 aaKnown RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 MGAT5Q09328 741 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 MPRIPQ6WCQ1 1025 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 SLF2Q8IX21 1173 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 TMTC2Q8N394 836 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 SUPT20HQ8NEM7 779 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 ERMNQ8TAM6 284 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 NEK9Q8TD19 979 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 LRRC8CQ8TDW0 803 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 WDR60Q8WVS4 1066 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 CKAP2Q8WWK9 683 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 DUSP9Q99956 384 aaKnown RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 ZDHHC18Q9NUE0 388 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 LNPEPQ9UIQ6 1025 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 ATP8A1Q9Y2Q0 1164 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 SMIM31A0A1B0GVY4 71 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 RGL2O15211 777 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 RGS16O15492 202 aaPredicted RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 TPD52L2O43399 206 aaKnown RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 DEXIO95424 95 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 LYNP07948 512 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 RASSF2P50749 326 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 USP11P51784 963 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 HGSNATQ68CP4 663 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 C2CD5Q86YS7 1000 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 KLHL7Q8IXQ5 586 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 C4orf32Q8N8J7 132 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 GIMAP8Q8ND71 665 aaPredicted RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 DIS3LQ8TF46 1054 aaKnown RBP8.79□□□□□ -1
CSDE1-214ENST00000530886 SPIRE2Q8WWL2 714 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 BAP1Q92560 729 aa8.79□□□□□ -1
CSDE1-214ENST00000530886 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.79□□□□□ -1
CSDE1-214ENST00000530886 GOLGA8AA7E2F4 631 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 PGRMC1O00264 195 aaKnown RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 ZNF213O14771 459 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 PSMA7O14818 248 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 RHOBTB3O94955 611 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 VCAM1P19320 739 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 ATP2C1P98194 919 aaPredicted RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 MTFR1Q15390 333 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 NAALADL2Q58DX5 795 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 RASIP1Q5U651 963 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 DDX42Q86XP3 938 aaKnown RBP eCLIP8.78□□□□□ -1
CSDE1-214ENST00000530886 NAT14Q8WUY8 206 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 SCG3Q8WXD2 468 aaKnown RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 GFM2Q969S9 779 aaKnown RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 ROPN1BQ9BZX4 212 aaPredicted RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 ROPN1Q9HAT0 212 aaPredicted RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 FGFR1OP2Q9NVK5 253 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 PTTG2Q9NZH5 202 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 TMOD4Q9NZQ9 345 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 KLHL14Q9P2G3 628 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 KCNJ14Q9UNX9 436 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 KIAA1551Q9HCM1 1747 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 BICDL2A1A5D9 508 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 TRIM49BA6NDI0 452 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 DAPK3O43293 454 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 HNRNPRO43390 633 aaKnown RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 GFPT2O94808 682 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 DDX58O95786 925 aaKnown RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 ALDH2P05091 517 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 GSTM4Q03013 218 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 SPIDRQ14159 915 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 PPP2R5EQ16537 467 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 LRRC24Q50LG9 513 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 SNX30Q5VWJ9 437 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 CGB2Q6NT52 195 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 MARK2Q7KZI7 788 aaKnown RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 NME8Q8N427 588 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 APPBP2Q92624 585 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 SLC7A6OSQ96CW6 309 aaPredicted RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 FAM81BQ96LP2 452 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 FMO2Q99518 471 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 PHF20Q9BVI0 1012 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 ZMYND12Q9H0C1 365 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 TUBA8Q9NY65 449 aaPredicted RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 ZNF212Q9UDV6 495 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 GDAQ9Y2T3 454 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 EPHB6O15197 1021 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 SLC1A4P43007 532 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 ACADVLP49748 655 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 PMS2P54278 862 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 SLC34A1Q06495 639 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 PDXDC1Q6P996 788 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 CCDC84Q86UT8 332 aaPredicted RBP8.78□□□□□ -1
CSDE1-214ENST00000530886 ECHDC2Q86YB7 292 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 SLC15A3Q8IY34 581 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 SLC17A8Q8NDX2 589 aa8.78□□□□□ -1
CSDE1-214ENST00000530886 NRG4Q8WWG1 115 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms