RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 PRAMEF18Q5VWM3 479 aa10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 AGMOQ6ZNB7 445 aa10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 CCDC129Q6ZRS4 1044 aa10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 ZNF589Q86UQ0 364 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 OXR1Q8N573 874 aa10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 PDZD8Q8NEN9 1154 aa10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 KCNN1Q92952 543 aa10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 NOL10Q9BSC4 688 aaKnown RBP10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 EPB41L4AQ9HCS5 686 aaPredicted RBP10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 HELLSQ9NRZ9 838 aa10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 TMOD2Q9NZR1 351 aa10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 KCNH3Q9ULD8 1083 aa10.45□□□□□ -0.74
CCDC90B-217ENST00000530253 NCANO14594 1321 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 RAD50Q92878 1312 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 DDTLA6NHG4 134 aaPredicted RBP10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 GSG1L2A8MUP6 293 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 HIP1O00291 1037 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 ETV2O00321 342 aaPredicted RBP10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 P4HBP07237 508 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 TNNI2P48788 182 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 GRM1Q13255 1194 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 PICALMQ13492 652 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 TSNAXIP1Q2TAA8 658 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 MCATQ8IVS2 390 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 MAPKAPK5Q8IW41 473 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 TGFBRAP1Q8WUH2 860 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 SDR42E1Q8WUS8 393 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 DHX38Q92620 1227 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 DPH2Q9BQC3 489 aaPredicted RBP10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 CRNKL1Q9BZJ0 848 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 SLC6A17Q9H1V8 727 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 ZNF408Q9H9D4 720 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 DIAPH3Q9NSV4 1193 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 DUSP13Q9UII6 198 aa10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 ABT1Q9ULW3 272 aaKnown RBP10.44□□□□□ -0.74
CCDC90B-217ENST00000530253 CCDC171Q6TFL3 1326 aa10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 LIG3P49916 1009 aa10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 TCP10Q12799 353 aa10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 GAB4Q2WGN9 574 aa10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 MCMDC2Q4G0Z9 681 aa10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 NBPF12Q5TAG4 269 aaPredicted RBP10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 VPS53Q5VIR6 699 aa10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 CWC27Q6UX04 472 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 IRF2BP1Q8IU81 584 aa10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 GPR62Q9BZJ7 368 aa10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 CEP131Q9UPN4 1083 aa10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 SMG5Q9UPR3 1016 aaKnown RBP10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 PCDHB5Q9Y5E4 795 aa10.43□□□□□ -0.74
CCDC90B-217ENST00000530253 PRRG2O14669 202 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 SGSM2O43147 1006 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 NUAK1O60285 661 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 CELF2O95319 508 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 HSPA1AP0DMV8 641 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 HSPA1BP0DMV9 641 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 GNAT2P19087 354 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 LINC00310P59036 64 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 ERVFC1P60507 584 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 DEFB115Q30KQ5 88 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 METTL16Q86W50 562 aaKnown RBP10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 DNAJB8Q8NHS0 232 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 DUSP15Q9H1R2 295 aaPredicted RBP10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 ADAMTS10Q9H324 1103 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 DNAJC18Q9H819 358 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 ATP8A2Q9NTI2 1148 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 SLC4A4Q9Y6R1 1079 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 OTOFQ9HC10 1997 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 LAMB1P07942 1786 aa10.42□□□□□ -0.74
CCDC90B-217ENST00000530253 ROBO3Q96MS0 1386 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 ZMYM6O95789 1325 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 FITM1A5D6W6 292 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 RASSF10A6NK89 507 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 B8ZZF3 427 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 SMIM22K7EJ46 135 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 PRPF40AO75400 957 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 CDC45O75419 566 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 CYP2D6P10635 497 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 RPL6Q02878 288 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 KCNA1Q09470 495 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 MAP3K11Q16584 847 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 CYP4F22Q6NT55 531 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 GIMAP6Q6P9H5 292 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 Q96M66 194 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 CWC22Q9HCG8 908 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 SAP30BPQ9UHR5 308 aaKnown RBP10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 PALD1Q9ULE6 856 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 FZD1Q9UP38 647 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 IVNS1ABPQ9Y6Y0 642 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 MYH1P12882 1939 aa10.41□□□□□ -0.74
CCDC90B-217ENST00000530253 CYP2D7A0A087X1C5 515 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 PATL2C9JE40 543 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 HSPD1P10809 573 aaKnown RBP10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 PLCD1P51178 756 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 GABPAQ06546 454 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 EGR3Q06889 387 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 ALX1Q15699 326 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 SUPT20HL1Q3ZLR7 823 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 SBK1Q52WX2 424 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 CTR9Q6PD62 1173 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 MOB2Q70IA6 237 aa10.4□□□□□ -0.74
CCDC90B-217ENST00000530253 IFNL3Q8IZI9 196 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms