RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 JAM3Q9BX67 310 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 CLDND1Q9NY35 253 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 SFMBT1Q9UHJ3 866 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 YBX2Q9Y2T7 364 aaKnown RBP6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 NRXN2Q9P2S2 1712 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 CNTNAP1P78357 1384 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 CARMIL3Q8ND23 1372 aa6.64□□□□□ -1.35
AMBRA1-209ENST00000529963 UBR2Q8IWV8 1755 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 ENPP3O14638 875 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 RASGRP1O95267 797 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 CRTAMO95727 393 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 NTRK1P04629 796 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 GLI1P08151 1106 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 GPR85P60893 370 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 MAP2K1Q02750 393 aaPredicted RBP6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 LSAMPQ13449 338 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 CNGB1Q14028 1251 aaPredicted RBP6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 XP32Q5T750 250 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 TBC1D9BQ66K14 1250 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 LBX2Q6XYB7 198 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 BRAPQ7Z569 592 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 IFNL3Q8IZI9 196 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 IL17REQ8NFR9 667 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 PLEKHO2Q8TD55 490 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 INTS4Q96HW7 963 aaKnown RBP6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 SCLYQ96I15 445 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 CFAP53Q96M91 514 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 BRIP1Q9BX63 1249 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 SIT1Q9Y3P8 196 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 HCFC2Q9Y5Z7 792 aa6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 AFDNP55196 1824 aaKnown RBP6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 COL3A1P02461 1466 aaPredicted RBP6.63□□□□□ -1.35
AMBRA1-209ENST00000529963 DLEC1Q9Y238 1755 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 SBF1O95248 1867 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 CCDC163A0A0D9SF12 145 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 ZNF503-AS2A6NEH8 195 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 BTBD11A6QL63 1104 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 NUDT19A8MXV4 375 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 PNLIPP16233 465 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 NCLP19338 710 aaKnown RBP6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 ST5P78524 1137 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 GUCY1A3Q02108 690 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 PABPC4Q13310 644 aaKnown RBP eCLIP6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 SNX17Q15036 470 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 TCEA2Q15560 299 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 PRR5LQ6MZQ0 368 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 MPZL3Q6UWV2 235 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 MAMDC2Q7Z304 686 aaPredicted RBP6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 CNBD1Q8NA66 436 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 TRMT2BQ96GJ1 504 aaKnown RBP6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 TMEM169Q96HH4 297 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 KCNJ15Q99712 375 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 NUDCQ9Y266 331 aa6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 VIRMAQ69YN4 1812 aaKnown RBP6.62□□□□□ -1.35
AMBRA1-209ENST00000529963 ZC3H12DA2A288 527 aaKnown RBP6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 PLD2O14939 933 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 CAMTA2O94983 1202 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 A1BGP04217 495 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 SRGAP2CP0DJJ0 459 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 HSPA8P11142 646 aaKnown RBP6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 SDSP20132 328 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 PRKAR2BP31323 418 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 ARL4AP40617 200 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 CORO7P57737 925 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 RSPO2Q6UXX9 243 aaPredicted RBP6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 DHX37Q8IY37 1157 aaKnown RBP6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 DIRC2Q96SL1 478 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 MRPL4Q9BYD3 311 aaKnown RBP6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 TAOK3Q9H2K8 898 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 CDIP1Q9H305 208 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 TRIM39Q9HCM9 518 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 CRTAC1Q9NQ79 661 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 CEMIPQ8WUJ3 1361 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 SCN7AQ01118 1682 aa6.61□□□□□ -1.35
AMBRA1-209ENST00000529963 AQP7O14520 342 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 IRS4O14654 1257 aaPredicted RBP6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 TRIM61Q5EBN2 209 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 GSTCDQ8NEC7 633 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 RTF1Q92541 710 aaKnown RBP6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 IPPKQ9H8X2 491 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 TNFRSF12AQ9NP84 129 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 ZNF652Q9Y2D9 606 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 TIAM2Q8IVF5 1701 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 KCNQ3O43525 872 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 SOD2P04179 222 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 DBHP09172 617 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 SNRPA1P09661 255 aaKnown RBP6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 U2AF1L5P0DN76 240 aaPredicted RBP6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 GLI4P10075 376 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 SRGNP10124 158 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 GRK2P25098 689 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 GRK3P35626 688 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 GTF2A2P52657 109 aa6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 U2AF1Q01081 240 aaKnown RBP eCLIP6.6□□□□□ -1.35
AMBRA1-209ENST00000529963 RAB3GAP1Q15042 981 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms