RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PSEN2P49810 448 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 POLGP54098 1239 aaPredicted RBP27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 ZNF445P59923 1031 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 MAPK7Q13164 816 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 MORC3Q14149 939 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 DHX33Q9H6R0 707 aaKnown RBP27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 SETD4Q9NVD3 440 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 TBC1D7Q9P0N9 293 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 PVALEFA0A1B0GWK0 134 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 HAS3O00219 553 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 CST5P28325 142 aaPredicted RBP27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 COASYQ13057 564 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 DPCR1Q3MIW9 517 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 FAM102BQ5T8I3 360 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 LRSAM1Q6UWE0 723 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 RNF180Q86T96 592 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 GDAQ9Y2T3 454 aa27.42■■□□□ 1.98
LDLRAD3-203ENST00000528989 FRMD3A2A2Y4 597 aa27.41■■□□□ 1.98
LDLRAD3-203ENST00000528989 RHOBTB3O94955 611 aa27.41■■□□□ 1.98
LDLRAD3-203ENST00000528989 TBC1D8BQ0IIM8 1120 aa27.41■■□□□ 1.98
LDLRAD3-203ENST00000528989 STK4Q13043 487 aa27.41■■□□□ 1.98
LDLRAD3-203ENST00000528989 DRP2Q13474 957 aa27.41■■□□□ 1.98
LDLRAD3-203ENST00000528989 HIC1Q14526 733 aa27.41■■□□□ 1.98
LDLRAD3-203ENST00000528989 EMC2Q15006 297 aa27.41■■□□□ 1.98
LDLRAD3-203ENST00000528989 HERC4Q5GLZ8 1057 aaPredicted RBP27.41■■□□□ 1.98
LDLRAD3-203ENST00000528989 TMEM143Q96AN5 459 aa27.41■■□□□ 1.98
LDLRAD3-203ENST00000528989 ZEB2O60315 1214 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 SMIM10L2AP0DMW4 78 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 SMIM10L2BP0DMW5 78 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 EHHADHQ08426 723 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 PPFIA1Q13136 1202 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 KCNB1Q14721 858 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 PKN2Q16513 984 aaKnown RBP27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 GLIS3Q8NEA6 775 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 SLC7A3Q8WY07 619 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 ZNF333Q96JL9 665 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 MTG1Q9BT17 334 aaPredicted RBP27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 FGFBP2Q9BYJ0 223 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 SUGCTQ9HAC7 445 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 ATP6V0A4Q9HBG4 840 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 SLC39A2Q9NP94 309 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 EXOC1Q9NV70 894 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 KPNA6O60684 536 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 MAFO75444 373 aaPredicted RBP27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 CCDC192P0DO97 292 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 GRIK4Q16099 956 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 MARCH8Q5T0T0 291 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 GAS2L3Q86XJ1 694 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 SFR1Q86XK3 245 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 CCDC65Q8IXS2 484 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 LRRC71Q8N4P6 559 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 MAPK8IP1Q9UQF2 711 aa27.4■■□□□ 1.98
LDLRAD3-203ENST00000528989 TBCAO75347 108 aaKnown RBP27.39■■□□□ 1.98
LDLRAD3-203ENST00000528989 KLRC1P26715 233 aa27.39■■□□□ 1.98
LDLRAD3-203ENST00000528989 NLRP12P59046 1061 aa27.39■■□□□ 1.98
LDLRAD3-203ENST00000528989 MKRN4PQ13434 485 aaPredicted RBP27.39■■□□□ 1.98
LDLRAD3-203ENST00000528989 MYCT1Q8N699 235 aa27.39■■□□□ 1.98
LDLRAD3-203ENST00000528989 ANP32EQ9BTT0 268 aa27.39■■□□□ 1.98
LDLRAD3-203ENST00000528989 ODF2LQ9ULJ1 636 aa27.39■■□□□ 1.98
LDLRAD3-203ENST00000528989 MKI67P46013 3256 aaKnown RBP27.39■■□□□ 1.98
LDLRAD3-203ENST00000528989 FAM13AO94988 1023 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 ZNF484Q5JVG2 852 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 PCSK9Q8NBP7 692 aaKnown RBP27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 DNAJC25Q9H1X3 360 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 RMND1Q9NWS8 449 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 PCDHA2Q9Y5H9 948 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 C22orf31O95567 290 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 ZNF131P52739 623 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 ACLYP53396 1101 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 ZNF200P98182 395 aaPredicted RBP27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 NBPF20Q3BBV1 942 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 C11orf57Q6ZUT1 292 aaPredicted RBP27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 KIAA0895Q8NCT3 520 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 LMBR1Q8WVP7 490 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 KATNAL1Q9BW62 490 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 PARVGQ9HBI0 331 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 HDAC6Q9UBN7 1215 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 COL4A3BPQ9Y5P4 624 aa27.38■■□□□ 1.97
LDLRAD3-203ENST00000528989 CD44P16070 742 aaKnown RBP27.37■■□□□ 1.97
LDLRAD3-203ENST00000528989 RFC5P40937 340 aa27.37■■□□□ 1.97
LDLRAD3-203ENST00000528989 ANO6Q4KMQ2 910 aa27.37■■□□□ 1.97
LDLRAD3-203ENST00000528989 ZNF658Q5TYW1 1059 aaPredicted RBP27.37■■□□□ 1.97
LDLRAD3-203ENST00000528989 METTL13Q8N6R0 699 aa27.37■■□□□ 1.97
LDLRAD3-203ENST00000528989 MCPH1Q8NEM0 835 aa27.37■■□□□ 1.97
LDLRAD3-203ENST00000528989 BSNDQ8WZ55 320 aa27.37■■□□□ 1.97
LDLRAD3-203ENST00000528989 IGKV6-21A0A0C4DH24 114 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 STX1AQ16623 288 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 EFCAB12Q6NXP0 572 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 TRIML1Q8N9V2 468 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 ARID2Q68CP9 1835 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 GRIN2DO15399 1336 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 GJB1P08034 283 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 CASP5P51878 434 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 ODR4Q5SWX8 454 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 MTHFD1LQ6UB35 978 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 C7orf31Q8N865 590 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 ARMC5Q96C12 935 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 FIZ1Q96SL8 496 aa27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 POLR3FQ9H1D9 316 aaPredicted RBP27.36■■□□□ 1.97
LDLRAD3-203ENST00000528989 ANO10Q9NW15 660 aa27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms