RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840		M0R296	226 aa		12.91	□□□□□ -0.34
PTP4A2-211	ENST00000528840	ADAMTS3	O15072	1205 aa		12.91	□□□□□ -0.34
PTP4A2-211	ENST00000528840	ADD1	P35611	737 aa	Known RBP	12.91	□□□□□ -0.34
PTP4A2-211	ENST00000528840	ZXDA	P98168	799 aa		12.91	□□□□□ -0.34
PTP4A2-211	ENST00000528840	ADCK5	Q3MIX3	580 aa		12.91	□□□□□ -0.34
PTP4A2-211	ENST00000528840	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.91	□□□□□ -0.34
PTP4A2-211	ENST00000528840	RASEF	Q8IZ41	740 aa		12.91	□□□□□ -0.34
PTP4A2-211	ENST00000528840	COLGALT1	Q8NBJ5	622 aa		12.91	□□□□□ -0.34
PTP4A2-211	ENST00000528840	ZNF577	Q9BSK1	485 aa		12.91	□□□□□ -0.34
PTP4A2-211	ENST00000528840	COL1A2	P08123	1366 aa		12.91	□□□□□ -0.34
PTP4A2-211	ENST00000528840	IGLV3-22	A0A075B6J6	115 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	hCG_1984214	I3L0E3	225 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	GPR32	O75388	356 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	CYP3A4	P08684	503 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	FXR2	P51116	673 aa	Known RBP eCLIP	12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	FGD1	P98174	961 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	APOBR	Q0VD83	1088 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	DUSP6	Q16828	381 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	IER5L	Q5T953	404 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	PDE12	Q6L8Q7	609 aa	Known RBP	12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	EFCAB12	Q6NXP0	572 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	BMP8A	Q7Z5Y6	402 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	FAM228A	Q86W67	206 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	ZNF713	Q8N859	430 aa	Predicted RBP	12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	VN1R2	Q8NFZ6	395 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	BBX	Q8WY36	941 aa	Predicted RBP	12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	APOL5	Q9BWW9	433 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	PHF7	Q9BWX1	381 aa	Predicted RBP	12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	CWH43	Q9H720	699 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	TBC1D22B	Q9NU19	505 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	TMEM161A	Q9NX61	479 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	GABBR1	Q9UBS5	961 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	PUF60	Q9UHX1	559 aa	Known RBP	12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	SAMM50	Q9Y512	469 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	PCDHA10	Q9Y5I2	948 aa		12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	MAFB	Q9Y5Q3	323 aa	Predicted RBP	12.9	□□□□□ -0.34
PTP4A2-211	ENST00000528840	C22orf31	O95567	290 aa		12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	PSAP	P07602	524 aa		12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	ZSCAN20	P17040	1043 aa	Predicted RBP	12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	NLRP11	P59045	1033 aa	Known RBP	12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	DSC3	Q14574	896 aa		12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	CBX2	Q14781	532 aa	Predicted RBP	12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	PFKFB3	Q16875	520 aa	Predicted RBP	12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	TSGA10IP	Q3SY00	556 aa		12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	PRR16	Q569H4	304 aa		12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	PLPP4	Q5VZY2	271 aa		12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	ZNF746	Q6NUN9	644 aa	Predicted RBP	12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	LLGL2	Q6P1M3	1020 aa		12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	LRRC55	Q6ZSA7	311 aa		12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	SKAP1	Q86WV1	359 aa		12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	ZNF668	Q96K58	619 aa	Predicted RBP	12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	CDCA3	Q99618	268 aa	Predicted RBP	12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	ELAC1	Q9H777	363 aa	Known RBP	12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	C6orf50	Q9HD87	102 aa		12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	TCEAL9	Q9UHQ7	104 aa		12.89	□□□□□ -0.35
PTP4A2-211	ENST00000528840	FSCN2	O14926	492 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	MAGEB2	O15479	319 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	CPA1	P15085	419 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	LAG3	P18627	525 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	TEC	P42680	631 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	CLCN3	P51790	818 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	KRT17	Q04695	432 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	SUGP1	Q8IWZ8	645 aa	Known RBP	12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	RNF169	Q8NCN4	708 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	CRYGN	Q8WXF5	182 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	MRPS27	Q92552	414 aa	Known RBP	12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	CASD1	Q96PB1	797 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	PHOX2B	Q99453	314 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	TCF25	Q9BQ70	676 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	ZMYND12	Q9H0C1	365 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	TMEM117	Q9H0C3	514 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	S1PR5	Q9H228	398 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	ENTPD7	Q9NQZ7	604 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	NRBP2	Q9NSY0	501 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	CEP131	Q9UPN4	1083 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	AKT3	Q9Y243	479 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	EVPL	Q92817	2033 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	KIAA1671	Q9BY89	1806 aa		12.88	□□□□□ -0.35
PTP4A2-211	ENST00000528840	PLXNA4	Q9HCM2	1894 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	CCDC196	A0A1B0GTZ2	297 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	HIDE1	A8MVS5	230 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	ATF7	P17544	494 aa	Predicted RBP	12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	TMOD1	P28289	359 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	PBX3	P40426	434 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	METAP2	P50579	478 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	PLCB3	Q01970	1234 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	KRT32	Q14532	448 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	MCTP2	Q6DN12	878 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	ANKRD54	Q6NXT1	300 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	KCNT2	Q6UVM3	1135 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	TMEM184A	Q6ZMB5	413 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840		Q6ZUG5	572 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	TMC7	Q7Z402	723 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	ABI1	Q8IZP0	508 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	REXO1	Q8N1G1	1221 aa	Known RBP	12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	LRRC71	Q8N4P6	559 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	PRSS33	Q8NF86	280 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	RASGRP4	Q8TDF6	673 aa		12.87	□□□□□ -0.35
PTP4A2-211	ENST00000528840	SUSD6	Q92537	303 aa		12.87	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms