RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 MOGSQ13724 837 aa8.01□□□□□ -1.13
PCF11-202ENST00000528336 MYBPC3Q14896 1274 aa8.01□□□□□ -1.13
PCF11-202ENST00000528336 KRTAP19-4Q3LI73 84 aa8.01□□□□□ -1.13
PCF11-202ENST00000528336 Q6ZUG5 572 aa8.01□□□□□ -1.13
PCF11-202ENST00000528336 BARX1Q9HBU1 254 aaPredicted RBP8.01□□□□□ -1.13
PCF11-202ENST00000528336 MCM8Q9UJA3 840 aa8.01□□□□□ -1.13
PCF11-202ENST00000528336 ATP8A1Q9Y2Q0 1164 aa8.01□□□□□ -1.13
PCF11-202ENST00000528336 COL4A3BPQ9Y5P4 624 aa8.01□□□□□ -1.13
PCF11-202ENST00000528336 MROH6A6NGR9 719 aa8□□□□□ -1.13
PCF11-202ENST00000528336 POLD1P28340 1107 aa8□□□□□ -1.13
PCF11-202ENST00000528336 PHC1P78364 1004 aa8□□□□□ -1.13
PCF11-202ENST00000528336 ADCY2Q08462 1091 aa8□□□□□ -1.13
PCF11-202ENST00000528336 NFATC3Q12968 1075 aa8□□□□□ -1.13
PCF11-202ENST00000528336 GPR158Q5T848 1215 aa8□□□□□ -1.13
PCF11-202ENST00000528336 IQSEC1Q6DN90 963 aa8□□□□□ -1.13
PCF11-202ENST00000528336 UNQ6494/PRO21346Q6UXR6 183 aa8□□□□□ -1.13
PCF11-202ENST00000528336 KCNC2Q96PR1 638 aa8□□□□□ -1.13
PCF11-202ENST00000528336 C9orf118A6NHY6 69 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 GPR39O43194 453 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 KDM1AO60341 852 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 ULK1O75385 1050 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 KIAA2012Q0VF49 1180 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 FZD5Q13467 585 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 TOP3AQ13472 1001 aaPredicted RBP7.99□□□□□ -1.13
PCF11-202ENST00000528336 GRAMD4Q6IC98 578 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 FRMD7Q6ZUT3 714 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 ESPNLQ6ZVH7 1005 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 GPR155Q7Z3F1 870 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 FAM124AQ86V42 546 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 RASSF3Q86WH2 238 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 KLHL36Q8N4N3 616 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 CLRN3Q8NCR9 226 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 ZDHHC5Q9C0B5 715 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 PARD6AQ9NPB6 346 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 PCDH12Q9NPG4 1184 aa7.99□□□□□ -1.13
PCF11-202ENST00000528336 A0A0G2JNJ9 132 aa7.98□□□□□ -1.13
PCF11-202ENST00000528336 OTOL1A6NHN0 477 aaPredicted RBP7.98□□□□□ -1.13
PCF11-202ENST00000528336 ELL2O00472 640 aaPredicted RBP7.98□□□□□ -1.13
PCF11-202ENST00000528336 SESN3P58005 492 aa7.98□□□□□ -1.13
PCF11-202ENST00000528336 PTPROQ16827 1216 aa7.98□□□□□ -1.13
PCF11-202ENST00000528336 COG1Q8WTW3 980 aa7.98□□□□□ -1.13
PCF11-202ENST00000528336 ANO3Q9BYT9 981 aa7.98□□□□□ -1.13
PCF11-202ENST00000528336 VTA1Q9NP79 307 aa7.98□□□□□ -1.13
PCF11-202ENST00000528336 Q9UFV3 132 aa7.98□□□□□ -1.13
PCF11-202ENST00000528336 FBXO10Q9UK96 956 aa7.98□□□□□ -1.13
PCF11-202ENST00000528336 PTPN22Q9Y2R2 807 aa7.98□□□□□ -1.13
PCF11-202ENST00000528336 CUTAO60888 179 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 HMGCRP04035 888 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 STAT5BP51692 787 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 RRADP55042 308 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 EVA1CP58658 441 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 RNF219Q5W0B1 726 aaPredicted RBP7.97□□□□□ -1.13
PCF11-202ENST00000528336 KIAA1841Q6NSI8 718 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 SPATS2Q86XZ4 545 aaKnown RBP7.97□□□□□ -1.13
PCF11-202ENST00000528336 IFNL2Q8IZJ0 200 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 ZCRB1Q8TBF4 217 aaKnown RBP7.97□□□□□ -1.13
PCF11-202ENST00000528336 RPGRQ92834 1020 aaKnown RBP7.97□□□□□ -1.13
PCF11-202ENST00000528336 FERMT2Q96AC1 680 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 MBD6Q96DN6 1003 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 GPATCH3Q96I76 525 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 AJUBAQ96IF1 538 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 TOPORSQ9NS56 1045 aaPredicted RBP7.97□□□□□ -1.13
PCF11-202ENST00000528336 USP36Q9P275 1121 aaKnown RBP7.97□□□□□ -1.13
PCF11-202ENST00000528336 KCNG1Q9UIX4 513 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 ADAM29Q9UKF5 820 aa7.97□□□□□ -1.13
PCF11-202ENST00000528336 B4GALT4O60513 344 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 PCDH8O95206 1070 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 CLEC2LP0C7M8 214 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 ZNF888P0CJ79 500 aaPredicted RBP7.96□□□□□ -1.14
PCF11-202ENST00000528336 IBSPP21815 317 aaPredicted RBP7.96□□□□□ -1.14
PCF11-202ENST00000528336 CSF2RBP32927 897 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 CDKN1CP49918 316 aaPredicted RBP7.96□□□□□ -1.14
PCF11-202ENST00000528336 BCAR1P56945 870 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 ANTXR2P58335 489 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 MAP3K12Q12852 859 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 FAM50AQ14320 339 aaKnown RBP7.96□□□□□ -1.14
PCF11-202ENST00000528336 BORAQ6PGQ7 559 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 SPOCD1Q6ZMY3 1216 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 KANSL1Q7Z3B3 1105 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 KBTBD2Q8IY47 623 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 CARD11Q9BXL7 1154 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 KATNBL1Q9H079 304 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 XYLT2Q9H1B5 865 aa7.96□□□□□ -1.14
PCF11-202ENST00000528336 PRSS38A1L453 326 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 PRKD3O94806 890 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 INHBBP09529 407 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 ETV4P43268 484 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 USP10Q14694 798 aaKnown RBP7.95□□□□□ -1.14
PCF11-202ENST00000528336 EIF4HQ15056 248 aaKnown RBP7.95□□□□□ -1.14
PCF11-202ENST00000528336 PDCD1Q15116 288 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 ZBTB41Q5SVQ8 909 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 TMEM200BQ69YZ2 307 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 LARP4Q71RC2 724 aaKnown RBP eCLIP7.95□□□□□ -1.14
PCF11-202ENST00000528336 CXorf67Q86X51 503 aaPredicted RBP7.95□□□□□ -1.14
PCF11-202ENST00000528336 RTKN2Q8IZC4 609 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 OR5AN1Q8NGI8 311 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 MTG2Q9H4K7 406 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 SLC5A4Q9NY91 659 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 KCMF1Q9P0J7 381 aa7.95□□□□□ -1.14
PCF11-202ENST00000528336 SAE1Q9UBE0 346 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms