RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 NBPF12Q5TAG4 269 aaPredicted RBP13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 NAA35Q5VZE5 725 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 PPP1R18Q6NYC8 613 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 MICALL2Q8IY33 904 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 MYCT1Q8N699 235 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 FAM76AQ8TAV0 307 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 ETNPPLQ8TBG4 499 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 RBM46Q8TBY0 533 aaKnown RBP13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 FAM151AQ8WW52 585 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 WNK4Q96J92 1243 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 CCDC43Q96MW1 224 aaKnown RBP13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 NCAPGQ9BPX3 1015 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 PSD3Q9NYI0 1048 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 CWC15Q9P013 229 aaKnown RBP13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 NFKBIEO00221 500 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 NFIBO00712 420 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 TBCAO75347 108 aaKnown RBP13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 XRCC5P13010 732 aaKnown RBP13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 UCHL3P15374 230 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 CYP2J2P51589 502 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 SPIRE1Q08AE8 756 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 BIRC2Q13490 618 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 HLTFQ14527 1009 aaKnown RBP eCLIP13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 KNOP1Q1ED39 458 aaKnown RBP13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 GANQ9H2C0 597 aa13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 RAVER2Q9HCJ3 691 aaKnown RBP13.08□□□□□ -0.32
CHMP1B-201ENST00000526991 SSU72P8A0A1W2PR75 194 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 TMEM150BA6NC51 233 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 ABCB4P21439 1286 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 NAB2Q15742 525 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 LENG9Q96B70 501 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 CEP63Q96MT8 703 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 EIF2AK1Q9BQI3 630 aaKnown RBP13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 CHORDC1Q9UHD1 332 aaPredicted RBP13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 NR3C1P04150 777 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 TRIM49P0CI25 452 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 TRIM49CP0CI26 452 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 PON1P27169 355 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 AARSP49588 968 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 GMPSP49915 693 aaPredicted RBP13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 USP11P51784 963 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 PRELPP51888 382 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 U2AF1L4Q8WU68 220 aaKnown RBP13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 VIPAS39Q9H9C1 493 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 EFCC1Q9HA90 598 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 PJA2O43164 708 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 ZEB2O60315 1214 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 AFPP02771 609 aaKnown RBP13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 MUM1L1Q5H9M0 696 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 SLFN12Q8IYM2 578 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 ERMNQ8TAM6 284 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 DYDC2Q96IM9 177 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 WDR18Q9BV38 432 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 GCNT4Q9P109 453 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 RABGAP1Q9Y3P9 1069 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 SAMM50Q9Y512 469 aa13.07□□□□□ -0.32
CHMP1B-201ENST00000526991 TNS1Q9HBL0 1735 aaKnown RBP13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 ARP10275 920 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 CAP2P40123 477 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 CCT5P48643 541 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 MTMR2Q13614 643 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 ALKBH5Q6P6C2 394 aaKnown RBP13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 IL31RAQ8NI17 732 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 TAF4BQ92750 862 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 ZIM3Q96PE6 472 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 TRIM31Q9BZY9 425 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 RAD51CO43502 376 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 COPB2P35606 906 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 ARHGAP44Q17R89 818 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 IRF2BP2Q7Z5L9 587 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 LDHDQ86WU2 507 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 CASKIN2Q8WXE0 1202 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 HOOK2Q96ED9 719 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 CCPG1Q9ULG6 757 aa13.06□□□□□ -0.32
CHMP1B-201ENST00000526991 HSF2BPO75031 334 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 LRRN2O75325 713 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 FLOT1O75955 427 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 FAM13AO94988 1023 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 GNA14O95837 355 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 EIF2AK2P19525 551 aaKnown RBP13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 RPA1P27694 616 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 GNGT1P63211 74 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 SPP2Q13103 211 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 PDCLQ13371 301 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 PRPF4BQ13523 1007 aaKnown RBP13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 RPS6KA1Q15418 735 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 TTMPQ5BVD1 217 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 HYIQ5T013 277 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 NSMFQ6X4W1 530 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 SRLQ86TD4 932 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 SYT2Q8N9I0 419 aaPredicted RBP13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 OR2W6PQ8NHA6 318 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 ELMO3Q96BJ8 720 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 IQCDQ96DY2 449 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 DDX47Q9H0S4 455 aaKnown RBP13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 GOPCQ9HD26 462 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 TMX2Q9Y320 296 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 MYO3BQ8WXR4 1341 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 TISP43B9A030 160 aa13.05□□□□□ -0.32
CHMP1B-201ENST00000526991 MYCLP12524 364 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms