RNA–Protein interactions for RNA: ENST00000526977.5

VPS28-207, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-207ENST00000526977 PPFIBP1Q86W92 1011 aa20.86■□□□□ 0.93
VPS28-207ENST00000526977 PRIMPOLQ96LW4 560 aa20.86■□□□□ 0.93
VPS28-207ENST00000526977 BAG1Q99933 345 aaPredicted RBP20.86■□□□□ 0.93
VPS28-207ENST00000526977 TELO2Q9Y4R8 837 aa20.86■□□□□ 0.93
VPS28-207ENST00000526977 TCF7P36402 384 aaPredicted RBP20.85■□□□□ 0.93
VPS28-207ENST00000526977 FLT3LGP49771 235 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 COASYQ13057 564 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 CCL14Q16627 93 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 CCDC65Q8IXS2 484 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 AFAP1L1Q8TED9 768 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 EEF2KMTQ96G04 330 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 MAGEC2Q9UBF1 373 aaPredicted RBP20.85■□□□□ 0.93
VPS28-207ENST00000526977 IGSF9BQ9UPX0 1349 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 NPHP3-ACAD11A0A0J9YXS1 232 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 GPR25O00155 361 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 RARRES1P49788 294 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 C1orf186Q6ZWK4 172 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 GLIS3Q8NEA6 775 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 CPLX3Q8WVH0 158 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 COPS5Q92905 334 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 CCDC43Q96MW1 224 aaKnown RBP20.85■□□□□ 0.93
VPS28-207ENST00000526977 AZI2Q9H6S1 392 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 MGAMO43451 1857 aa20.85■□□□□ 0.93
VPS28-207ENST00000526977 ZNF862O60290 1169 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 STX10O60499 249 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 GNRH1P01148 92 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 CYP2C19P33261 490 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 STAT5BP51692 787 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 UBXN1Q04323 297 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 ARHGAP1Q07960 439 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 GIT2Q14161 759 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 LRRC41Q15345 812 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 PTPN14Q15678 1187 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 XKR3Q5GH77 459 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 ZNF507Q8TCN5 953 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 PANX2Q96RD6 677 aa20.84■□□□□ 0.93
VPS28-207ENST00000526977 ARHGAP6O43182 974 aa20.83■□□□□ 0.93
VPS28-207ENST00000526977 ZNF865P0CJ78 1059 aaPredicted RBP20.83■□□□□ 0.93
VPS28-207ENST00000526977 ARHGEF6Q15052 776 aa20.83■□□□□ 0.93
VPS28-207ENST00000526977 TMEM63BQ5T3F8 832 aa20.83■□□□□ 0.93
VPS28-207ENST00000526977 PPP1R13BQ96KQ4 1090 aa20.83■□□□□ 0.93
VPS28-207ENST00000526977 GABRQQ9UN88 632 aa20.83■□□□□ 0.93
VPS28-207ENST00000526977 PCDHA2Q9Y5H9 948 aa20.83■□□□□ 0.93
VPS28-207ENST00000526977 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.83■□□□□ 0.938e-7■■□□□ 13.6
VPS28-207ENST00000526977 THSD7BQ9C0I4 1608 aa20.83■□□□□ 0.93
VPS28-207ENST00000526977 DOCK5Q9H7D0 1870 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 FRMD3A2A2Y4 597 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 LGALS16A8MUM7 142 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 HSPA6P17066 643 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 SMPD1P17405 629 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 GUCY2CP25092 1073 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 TNFAIP2Q03169 654 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 PRKCZQ05513 592 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 PADI6Q6TGC4 694 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 ANO5Q75V66 913 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 PLPPR4Q7Z2D5 763 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 PPTC7Q8NI37 304 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 TUBGCP2Q9BSJ2 902 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 RUSC1Q9BVN2 902 aa20.83■□□□□ 0.92
VPS28-207ENST00000526977 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.82■□□□□ 0.92
VPS28-207ENST00000526977 LGR5O75473 907 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 STBD1O95210 358 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 GYPCP04921 128 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 CASP14P31944 242 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 SLC26A2P50443 739 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 PRKCEQ02156 737 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 MAP2K1Q02750 393 aaPredicted RBP20.82■□□□□ 0.92
VPS28-207ENST00000526977 XKR9Q5GH70 373 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 FAM26FQ5R3K3 315 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 PRAMEF19Q5SWL8 479 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 UTP14CQ5TAP6 766 aaKnown RBP20.82■□□□□ 0.92
VPS28-207ENST00000526977 MFSD14CQ5VZR4 134 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 FAM114A1Q8IWE2 563 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 PCYT2Q99447 389 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 REEP2Q9BRK0 252 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 NRBP2Q9NSY0 501 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 ODF2LQ9ULJ1 636 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 FXR1P51114 621 aaKnown RBP eCLIP20.82■□□□□ 0.92
VPS28-207ENST00000526977 CACNB1Q02641 598 aaPredicted RBP20.82■□□□□ 0.92
VPS28-207ENST00000526977 RAD51AP2Q09MP3 1159 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 MYOCDQ8IZQ8 938 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 ERO1AQ96HE7 468 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 CNOT6LQ96LI5 555 aaKnown RBP20.82■□□□□ 0.92
VPS28-207ENST00000526977 TIPINQ9BVW5 301 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 COL4A3BPQ9Y5P4 624 aa20.82■□□□□ 0.92
VPS28-207ENST00000526977 LOXHD1Q8IVV2 1947 aa20.81■□□□□ 0.92
VPS28-207ENST00000526977 EMSYQ7Z589 1322 aa20.81■□□□□ 0.92
VPS28-207ENST00000526977 UQCRHLA0A096LP55 91 aa20.81■□□□□ 0.92
VPS28-207ENST00000526977 PPFIA4O75335 1185 aa20.81■□□□□ 0.92
VPS28-207ENST00000526977 OATP04181 439 aa20.81■□□□□ 0.92
VPS28-207ENST00000526977 UQCRHP07919 91 aa20.81■□□□□ 0.92
VPS28-207ENST00000526977 HERC4Q5GLZ8 1057 aaPredicted RBP20.81■□□□□ 0.92
VPS28-207ENST00000526977 GLG1Q92896 1179 aa20.81■□□□□ 0.92
VPS28-207ENST00000526977 SMARCAD1Q9H4L7 1026 aa20.81■□□□□ 0.92
VPS28-207ENST00000526977 TBC1D7Q9P0N9 293 aa20.81■□□□□ 0.92
VPS28-207ENST00000526977 SRRDQ9UH36 339 aa20.81■□□□□ 0.92
VPS28-207ENST00000526977 FAM184BQ9ULE4 1060 aa20.81■□□□□ 0.92
VPS28-207ENST00000526977 RNF225M0QZC1 329 aaPredicted RBP20.8■□□□□ 0.92
VPS28-207ENST00000526977 FKTNO75072 461 aa20.8■□□□□ 0.92
VPS28-207ENST00000526977 MFAP3LO75121 409 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms