RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ARID5AQ03989 594 aa4.52□□□□□ -1.69
ECHDC1-219ENST00000526299 MTDHQ86UE4 582 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-219ENST00000526299 BCL6BQ8N143 479 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-219ENST00000526299 PCDH19Q8TAB3 1148 aa4.52□□□□□ -1.69
ECHDC1-219ENST00000526299 NTN5Q8WTR8 489 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-219ENST00000526299 RABGGTAQ92696 567 aa4.52□□□□□ -1.69
ECHDC1-219ENST00000526299 HAS1Q92839 578 aa4.52□□□□□ -1.69
ECHDC1-219ENST00000526299 MIEF2Q96C03 454 aa4.52□□□□□ -1.69
ECHDC1-219ENST00000526299 ZNF764Q96H86 408 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-219ENST00000526299 CLASP2O75122 1294 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-219ENST00000526299 FGRP09769 529 aa4.51□□□□□ -1.69
ECHDC1-219ENST00000526299 PTGS2P35354 604 aa4.51□□□□□ -1.69
ECHDC1-219ENST00000526299 ST5P78524 1137 aa4.51□□□□□ -1.69
ECHDC1-219ENST00000526299 CRY1Q16526 586 aa4.51□□□□□ -1.69
ECHDC1-219ENST00000526299 ZNF662Q6ZS27 426 aa4.51□□□□□ -1.69
ECHDC1-219ENST00000526299 C16orf59Q7L2K0 433 aa4.51□□□□□ -1.69
ECHDC1-219ENST00000526299 MCF2L2Q86YR7 1114 aa4.51□□□□□ -1.69
ECHDC1-219ENST00000526299 SMURF1Q9HCE7 757 aa4.51□□□□□ -1.69
ECHDC1-219ENST00000526299 PTGFRNQ9P2B2 879 aa4.51□□□□□ -1.69
ECHDC1-219ENST00000526299 CTDP1Q9Y5B0 961 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-219ENST00000526299 PRAMEF22A3QJZ6 481 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 ZNF561-AS1K7EIQ3 104 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 MASP2O00187 686 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 TRAF5O00463 557 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 AQP7O14520 342 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 ADCY7P51828 1080 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 GUCY1A3Q02108 690 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 TM4SF20Q53R12 229 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 GAREM2Q75VX8 874 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 GSPT2Q8IYD1 628 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 LRRC47Q8N1G4 583 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 ASB15Q8WXK1 588 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 RPL10LQ96L21 214 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 GPHA2Q96T91 129 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 MLST8Q9BVC4 326 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 GPR87Q9BY21 358 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 RIOX1Q9H6W3 641 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 ZNHIT2Q9UHR6 403 aa4.5□□□□□ -1.69
ECHDC1-219ENST00000526299 XDHP47989 1333 aa4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 GSTA4O15217 222 aa4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 KLF4O43474 513 aa4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 DNM2P50570 870 aa4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 ELAVL1Q15717 326 aaKnown RBP4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 RHOUQ7L0Q8 258 aa4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 GLCCI1Q86VQ1 547 aa4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 PRIMA1Q86XR5 153 aa4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 ST13P5Q8NFI4 369 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 SLC25A43Q8WUT9 341 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 PTPRN2Q92932 1015 aa4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 MAGEL2Q9UJ55 1249 aa4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 PCDHA9Q9Y5H5 950 aa4.49□□□□□ -1.69
ECHDC1-219ENST00000526299 KLRG2A4D1S0 409 aaPredicted RBP4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 C2orf78A6NCI8 922 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 RASSF10A6NK89 507 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 ARVCFO00192 962 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 SCDO00767 359 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 RHOBTB3O94955 611 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 RABGGTBP53611 331 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 RABL3Q5HYI8 236 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 FSTL4Q6MZW2 842 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 FAM111BQ6SJ93 734 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 ZNF276Q8N554 614 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 HIPK4Q8NE63 616 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 LENG9Q96B70 501 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 PGBD4Q96DM1 585 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 IPO9Q96P70 1041 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 GBP4Q96PP9 640 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 CDC6Q99741 560 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 SPATA9Q9BWV2 254 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 SLC6A15Q9H2J7 730 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 TRPS1Q9UHF7 1281 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 PACSIN3Q9UKS6 424 aa4.48□□□□□ -1.69
ECHDC1-219ENST00000526299 UBE2QL1A1L167 161 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 CCDC66A2RUB6 948 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 NR4A1P22736 598 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 C21orf58P58505 322 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 ADAM8P78325 824 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 FAM47CQ5HY64 1035 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 FAM209AQ5JX71 171 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 ZKSCAN2Q63HK3 967 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 KLHDC10Q6PID8 442 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 MAMDC2Q7Z304 686 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 ZC3H7AQ8IWR0 971 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 ANKRD53Q8N9V6 530 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 PROKR1Q8TCW9 393 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 LPPQ93052 612 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 SLC7A6OSQ96CW6 309 aaPredicted RBP4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 VWA7Q9Y334 891 aa4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 RBM8AQ9Y5S9 174 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-219ENST00000526299 GRID2IPA4D2P6 1211 aa4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 FOXP2O15409 715 aa4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 APEX1P27695 318 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 BPIFB4P59827 614 aa4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 KRTAP10-11P60412 298 aa4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 LACTBP83111 547 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 NOSTRINQ8IVI9 506 aa4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 ELOA2Q8IYF1 753 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 SYNE4Q8N205 404 aa4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 CISD2Q8N5K1 135 aaKnown RBP4.46□□□□□ -1.7
ECHDC1-219ENST00000526299 BBC3Q96PG8 261 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms